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LOCUS XM_013242297 5431 bp mRNA linear INV 02-SEP-2023 (LOC106080767), mRNA. ACCESSION XM_013242297 VERSION XM_013242297.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013242297.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5431 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5431 /gene="LOC106080767" /note="protein son of sevenless; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:106080767" CDS 360..5243 /gene="LOC106080767" /codon_start=1 /product="protein son of sevenless" /protein_id="XP_013097751.2" /db_xref="GeneID:106080767" /translation="MFSVQYGSVGGGTMMGDSDGYDFSKSENAARWKGLFMPSLKKVL EQVHPRLTAKEEALLFVETLCLRILAVLCAKPLPHTVQDIEDKVRKYFPSPIDCWALN EAKETLLCKKRRSVLPTERVHTLLQKDVLQCKMDSSVTVFLVAVLEYISADILKLAGN YVRKIKHYQISKADIEVAMCADKVLMDMFYQSDMKSNVLPSPLPTLPVQRASTTYEEI VKDLINDEKQYQRDLHMIIRVFREELSKIVRNPKELEQIFSNIMDIYEVAVTLLSSLE DVVEMSQEQNAPCVGSCFEELAEAEEFDVYTKYAQEVTSQASTDALTALLARPDAMSL MSAGHGFRDAVKYYLPKLLLVPIWHAFMYFDYIKILMKYSPSQDDIESFEQVQGLLRP LRNDLENIVATLPKESCVAMSSRARRQLAIDRTRELQNTVEHWDKDVGQNCNEFIRED VLGKLGSGKRIAERKAYLFDGLMLLCKPNTKRQALSTNAQVYEYRLKEKFYMRRVEIN DRPDTDELKHSFEVAPRIQAPVTLAAKSGPHKNDWMADLIMVNTKSMLDRILDSILLD IEKKHPLRMPSTDLYKFAEPDSPNNIVLEERESAGVPLIKGATLCKLIERLTYHIYAD PMFVRTFLTTYRYFCTPQNLLSLLVDRFNIPDPSLVYTDQHNNDKESTHCESDKLHKN SQREDWKRYRKEYVQPVQFRVLNVLRHWVDHHFYDFEKDPPLLERLLYFLEGVNGKSM RKWVDSVLKIVQRKSEQEKCQKQITFAYGHNPPPIEHHLNVPDSDITLLTLHPLELAR QLTLLEFELYKNVKPSELVGSPWTKKDKEQKSPNLLKIMKHTTNVTRWIEKTIIEAEN YEERVAMVTRAIEVMMAMLELNNFNGILSISAAMGSASVYRLKLTFQGLPARYEKFLE ECRELNDGHLKKYQERLRSINPPCVPFFGRYLTNILHLEEGNPDFLPNTDLINFSKRR KVSEIIGEIQQYQNQPYCLMPDAKIRKFLENLDPFEGMTDTEISNFLYNESLRIEPRG CKQPPKFPRKWASVTLKSPGIKPRRQNINNSSSTSNSLASTNNGAVSTVPSTAQTLVA TRSHSFTPMTSETNADCEQCSPSNSTSFNANANANAQTASSTNSQAFSVFANVNIPKR NGSKSISTTATMADLQDANALVAQSAMKRTEDEFGEAPFLPKKGAAACVPPFTASLAD ESALPIFELAATGPDDSIAAAQATQLTSNRISWDTQAVFDSDSLISPLPKVVVSPLRG LSHTSNLPPFHPAASMQNSDGTTTTTNTTTSYFSSAENAVAITASPKSQSSELDFCSA SVPVSPHVNVPTSANVRYRTAPPPLPPRRKDRTESCADIAQKRQAPDAPMLPPRDGEM SPPPIPPRISNHPHYHCHSNVSNFHGPSDDFMNASSLLLPNTSTIMKRRNSAIKKRTD ATTGATTNLTCSTSSLMLSNVTMISASSLAATANHANLLNALPQLGHLSTAAAISSDD QSISPALSSSTTTSPITPMTPVSPHNLSGYQPADISQHSQLILKNISSSSLSVFPQHL PVYLQQHSHQTLQQTTTHHHHTNVAIGGSPQRPPTKDLCPNVENILKLPPKPNLGGDT CSDSDKCTMFPYPSTNH" polyA_site 5431 /gene="LOC106080767" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtcgactttt agatccctac cttgcagaat accagaatac gaacaggaaa aaattactgg 61 aaattttaat gtgttaaaag aagaaaacat aaaatataat gaagacgatt taacgaaacg 121 aaaaaatgaa tatcaagagc atgagcaatc ggtgtaacgt aaaatcaaag taaccagcta 181 aaaaaaagac atacttaaga cttcgagtgt acataaatcg tgaatcggaa atataatgaa 241 aattctttaa acgatggtta aggtgggata agcatcaaaa gtggttctca gtttttgagt 301 tttgtgcgat aaccaggtgg ctaaggttcc gcagagtaca taaaggatac acttctacga 361 tgttttccgt tcaatacggg agtgttggtg gggggaccat gatgggtgat tctgatggct 421 acgacttctc gaagagtgag aatgctgcta gatggaaagg cttgtttatg ccgtctttga 481 aaaaggtttt agagcaagtt catcctcgtc ttacggctaa agaagaggcg ttgttgtttg 541 tggaaacgtt gtgtttgcga attttggctg tgctttgcgc aaagcctctg ccccacaccg 601 ttcaagacat cgaagacaaa gttcgaaagt atttcccgtc gccaatcgac tgctgggcat 661 tgaatgaagc taaagaaacg ctgctgtgca aaaagcgccg atcagtcttg cccacagaac 721 gggtgcacac attgctgcaa aaggatgttt tgcagtgcaa aatggatagt tcggtgacag 781 tttttctggt tgccgtattg gaatacattt ctgcggatat tctgaaatta gctggtaatt 841 atgttagaaa aattaaacac tatcaaatat cgaaggcgga catagaagtt gcaatgtgcg 901 ccgacaaggt cctcatggac atgttctatc agtcggacat gaaatcgaat gttctgccta 961 gtcctttgcc gacgctgccg gtccagcgtg ccagcacaac gtacgaggaa attgttaaag 1021 atttgataaa cgacgaaaaa caatatcaac gcgacttaca catgatcatt cgtgtatttc 1081 gagaggagct aagtaaaatt gtaagaaacc ctaaggagct tgagcaaatc ttctccaata 1141 taatggacat ctacgaagtg gcagtaacac tgttgagctc actggaagat gtcgttgaaa 1201 tgtcacaaga gcaaaatgcc ccttgtgttg gtagctgttt cgaggaattg gctgaagctg 1261 aagaattcga cgtttataca aagtacgcac aagaagtgac gtcgcaggca tcaaccgatg 1321 ccttgaccgc attgcttgca cggccagatg caatgtctct gatgtctgca ggccatggct 1381 ttcgggacgc cgtaaaatac tacttaccaa aattgctgtt ggtacccata tggcatgcat 1441 tcatgtattt cgactatata aaaatcctaa tgaaatacag tccgtcacag gatgacattg 1501 aaagcttcga gcaagtgcaa ggtctactgc gtcccctaag aaacgacctt gagaatattg 1561 ttgctacgtt accaaaggaa tcttgcgttg ccatgagcag ccgagcccgc cgtcaactag 1621 ccatcgatcg aactagggaa ctgcagaata cggtcgaaca ctgggacaag gatgtgggac 1681 agaactgcaa tgagtttata cgggaagatg tattgggcaa gcttggctct ggaaaaagaa 1741 ttgcggaacg caaggcatac ctcttcgatg gtttgatgct gctctgtaag cccaatacga 1801 aacgccaggc tttgtcgaca aacgcccaag tctacgagta tcgcttgaaa gagaaattct 1861 acatgaggcg ggtggaaata aatgaccgcc ctgacaccga tgaactcaaa cactccttcg 1921 aggtggcacc acgaatacag gcacccgtta ccctcgccgc caaaagtggc ccccacaaga 1981 atgactggat ggccgatctt attatggtga atacgaagtc tatgctggac agaattttgg 2041 atagcatact gcttgacatc gagaagaaac atccattacg catgcccagt acagatctat 2101 acaagtttgc cgaaccggac agtcccaaca acattgtgct tgaagaaaga gagagtgccg 2161 gagtacctct cataaaaggc gccactctgt gtaagcttat tgagaggctg acttatcaca 2221 tctacgccga tcccatgttt gtgcgaacct ttctcacaac atatcgatac ttctgtacgc 2281 cacaaaacct tttgtcactt ttagttgacc gcttcaatat accagatccc agtctggtgt 2341 acaccgacca acacaataac gacaaggaaa gcacgcactg cgaatctgac aaattgcaca 2401 aaaactccca aagagaagat tggaagcgat accgcaagga atatgtgcag ccggtgcaat 2461 ttagagtgct aaatgttttg agacactggg ttgatcacca tttctacgat ttcgagaagg 2521 atcctccgtt gctggagaga ctgctgtatt tcctagaagg tgtcaatggc aaatccatga 2581 gaaaatgggt ggactcagtg ctaaaaatag tacaaagaaa gagcgaacaa gagaaatgtc 2641 aaaaacagat cactttcgca tatgggcata atccgccgcc aatagaacat cacctgaatg 2701 tacccgattc ggacataaca ttgctgactc tacatccctt ggagctggca aggcagttga 2761 ccctcttgga gtttgaattg tataaaaatg tgaagccatc ggagttggtg ggttcgccct 2821 ggacaaaaaa ggacaaggag caaaaaagcc caaatctgct taaaatcatg aaacacacaa 2881 caaatgtgac gcgctggata gagaaaacta ttattgaagc cgaaaactac gaagagcgag 2941 tagctatggt aacgcgagcc atcgaagtga tgatggcaat gctagagctt aacaatttca 3001 acggaatatt gtccattagc gctgcgatgg gcagtgcatc ggtgtatcgt ctgaaattaa 3061 cattccaagg tctgccagca cgctacgaga aatttctgga ggaatgccgc gagctaaacg 3121 atggacatct aaagaaatat caagagcgct tgcgttccat caatcctccg tgtgtgccgt 3181 tttttggtcg ctatttaaca aatatactgc acttggaaga aggcaacccc gacttccttc 3241 caaacaccga ccttattaat ttctcgaagc gacgaaaggt ttccgaaatt attggtgaaa 3301 ttcaacagta tcaaaatcag ccatactgtc taatgccgga tgctaaaata agaaaattcc 3361 tggaaaattt ggaccctttc gagggcatga cggataccga aatatcaaat tttttgtaca 3421 atgaaagtct tcgcattgag cccagggggt gtaagcaacc tcccaaattt cccaggaagt 3481 gggcgtctgt aacactgaaa tcaccgggta ttaagcctcg ccgacaaaat attaacaaca 3541 gcagcagtac gagcaacagt ttagcctcca caaacaatgg tgctgtcagc accgtcccta 3601 gtacggccca aacactggtg gccacacggt cccactcgtt tacaccaatg acgagtgaaa 3661 caaacgctga ttgtgagcag tgttcgccga gtaatagtac cagcttcaat gcaaatgcaa 3721 atgcgaatgc gcaaacagcc agcagtacca acagccaggc attctccgta tttgccaacg 3781 tcaacatacc aaaacgcaat gggtctaaaa gcatctcaac cactgcaaca atggctgatt 3841 tgcaggatgc aaacgcatta gtagcacagt cagcaatgaa gcgaaccgaa gacgagtttg 3901 gcgaagcacc ttttttgccc aaaaagggag cagcggcatg tgtgccacca tttacggcat 3961 ctttggcgga tgagagtgct ttgccaattt ttgaactggc tgctacaggg ccagacgatt 4021 ctattgcagc agcacaagca actcaattaa catctaatcg gatttcttgg gatactcagg 4081 cggtattcga tagtgattcg ctaatatccc ccttgccaaa agtagtggtt agtccactgc 4141 gcggtttaag tcacacaagc aatctacctc cattccaccc tgcagcttca atgcagaatt 4201 ctgatggcac aacaacaaca acaaacacaa ccacaagtta tttcagttcc gccgagaacg 4261 ctgtggcgat tacagcaagt cccaaatcgc agagttcgga gttggatttc tgtagcgcat 4321 ccgtacctgt ttcaccacac gtaaatgtac cgacgtcagc aaatgttcgc tatcgtacag 4381 cgccaccacc tcttccgccc cgaagaaagg accgcaccga aagttgtgca gacatagctc 4441 aaaaacgcca agcaccagat gccccaatgc ttccgccacg ggatggcgag atgagtcccc 4501 ctcccattcc accaagaata agcaaccatc ctcattacca ttgccattcc aacgtatcga 4561 atttccatgg accaagtgat gacttcatga atgcaagcag tttgctcttg cccaatacaa 4621 gcaccattat gaagcggcga aattcggcaa taaagaagcg caccgatgct acaaccggtg 4681 ctaccaccaa ccttacatgt tccacatcgt cattaatgtt gtcaaacgta acaatgatct 4741 cagcctcttc gcttgcagca actgcaaatc atgcaaatct acttaatgca ctgccccaac 4801 taggccactt gagcacagca gcagccatct catcggatga ccaatcaatc tcgccggcat 4861 taagctcttc cacaacgaca tcgcccataa caccaatgac acccgtatca ccgcacaatc 4921 tctccggcta tcagccagcc gacatctcgc agcactccca attaatcctc aagaatattt 4981 caagttcctc actatcggta tttcctcaac acctacctgt ataccttcaa caacactcac 5041 atcaaactct acaacaaact accactcatc accaccatac taacgttgcg attggcggca 5101 gcccccaaag gccgccaacc aaagatctat gcccaaatgt ggaaaacata ctcaagcttc 5161 cgccaaagcc caatcttggc ggggatactt gcagcgactc ggacaaatgt accatgtttc 5221 cttacccaag tacaaatcat taatagtatt gtatgcctag tgatgtgata tgggtgcaag 5281 agaactaact cgatatagat gtatgatgat gatgatgatg atgatgatgg tgatgatgat 5341 cactgatctg ttatgttatt gtaaataaaa tacattattg aacgtagaac atgataataa 5401 taataaaaac aaaaacgata ccattgttaa a