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LOCUS XM_013242288 2802 bp mRNA linear INV 02-SEP-2023 (LOC106080761), transcript variant X1, mRNA. ACCESSION XM_013242288 VERSION XM_013242288.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013242288.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2802 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2802 /gene="LOC106080761" /note="protein no-on-transient A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins" /db_xref="GeneID:106080761" CDS 164..2362 /gene="LOC106080761" /codon_start=1 /product="protein no-on-transient A isoform X1" /protein_id="XP_013097742.2" /db_xref="GeneID:106080761" /translation="MNTKAAVNGGGPLPQRPQKNQVGDKNSDKGMEGPAEKKPRFNQG GPAQNNQQNQNQNKGFGNKNNNNNQGFGNRKNRGGGNQNQNVNRGNFQNQNNQQQQQQ QQQKPAQAQAATPAAKDEKPAADTKPAANNAPAQQQNQQNQNQQNQNQQNQNQNQQNQ NQQQKPNQQNQQNQHNQQNQQNQQNQQNQQNQQQNQQNQQQNQMQQQFQQNQNMNRQQ GGGGGGGFGGGGFGGDGMMGRGGNRDRGQKRDRNFGNRDNRDGGNQRGGGGGGGGDGP RGNRNDDFFVNQRLRSICGPTHEMEPIQTAEESKFSGRNRLYVGNLTGEVSEEELREL FKPFGEIAEVFCNSEKNFAFLKMDFHANAERAKRELDGSNRKGRVLRVRFAPNATILR VANLTPFVSNELLYRAFEIFGPVERALVNVDDRGKSTGEGIVEFAKKSSANICLRYCN EKCYFLTASLRPCVVEPFELNDDNDGLPDKSLNKKLAEFNHERGIGPRFAERGSFEHE YGTRWKQLHELYKSKQEALKRELKMEEEKLEAQMEYARYEHETELLRQELRKRESDNE RKKMEWEMREKQAEEMRKRDEEQVRRQQTEMQSRMMRQEEEMRRRQQENTLFMQAQQL NSLLDQQEGGFSGNCNNFDGFGNNPNPFDFRGNNNGGGNGPNGPNGPSGPSGANGPNG PNNPQDFGFEFGGNQNQPSGGDNGNRGGGGPQRGGNSGGNNNPWERRRRF" polyA_site 2802 /gene="LOC106080761" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cacacacaca aacaacttcc gcaaacgaac tgtctagctg tgtatcagca atttatctct 61 ttcatttcat tttcaaattt tggtgaggta gcaagtagta caataataca acaaacgcta 121 ataaaacagt gaaaaagtga aaaaaagaaa tttgtgaaaa gtgatgaata ctaaagctgc 181 agtaaatgga ggtggccctt tgccccaaag accgcagaaa aatcaagtag gagataagaa 241 ttcggataaa ggaatggaag gccccgccga gaaaaagcca cgttttaacc aaggtggtcc 301 agctcagaat aatcagcaga atcaaaatca gaataaaggt tttggcaaca agaataataa 361 taataatcaa ggctttggaa acaggaaaaa tcgtggaggt ggcaatcaaa accaaaacgt 421 caaccgtgga aatttccaaa atcagaacaa tcaacaacaa caacagcagc agcagcaaaa 481 gcccgctcaa gcacaggctg ctacgcccgc tgctaaggat gagaaaccag cagccgatac 541 aaaaccagct gctaacaatg ctccagcaca gcagcaaaat caacagaacc agaatcaaca 601 aaatcagaac caacaaaatc agaatcagaa tcagcaaaac cagaatcaac aacagaagcc 661 aaatcagcaa aaccaacaga atcaacataa ccaacaaaac caacagaatc aacagaacca 721 acaaaatcag caaaatcaac aacaaaatca gcaaaatcaa caacaaaatc agatgcagca 781 gcagttccag caaaatcaaa acatgaatcg ccaacagggt ggtggcggcg gcggcggctt 841 tggtggtggt ggctttggtg gtgacggaat gatgggaaga ggaggaaacc gagatcgtgg 901 acaaaaacgt gatcgcaact ttggcaatcg tgacaatcgt gacggtggca atcaaagagg 961 aggtggcggc ggcggtggtg gcgatggacc ccgcggtaat cgcaatgacg atttcttcgt 1021 taaccaacgt ttacgctcaa tttgtggacc cacacacgag atggagccaa tccaaacggc 1081 cgaagaaagc aagttctctg ggcgcaatcg tctctatgtt ggcaacttga cgggcgaagt 1141 tagcgaggaa gagctacgtg aactcttcaa gccatttggc gaaatcgctg aagtattctg 1201 caattcggaa aagaactttg cattccttaa aatggacttt cacgcaaatg ctgagcgtgc 1261 caagagggaa cttgatggct cgaatcgtaa aggccgcgtt ttgcgtgttc ggtttgctcc 1321 aaatgccacc attttgcgtg ttgccaattt gacaccattt gtttccaatg aattgcttta 1381 cagagccttc gaaatattcg ggcccgtaga aagagcattg gtcaatgtcg atgatcgtgg 1441 caagtccact ggtgaaggca ttgttgagtt cgcaaagaaa tcttcggcaa atatttgctt 1501 gcgttattgc aatgagaagt gctacttttt aaccgcttct ctgcgaccat gcgttgtaga 1561 gccattcgaa ctcaatgatg acaacgatgg cctgccagac aaatcattga acaaaaaatt 1621 ggccgagttc aatcatgagc gcggaattgg cccccgcttt gccgaacgtg gtagctttga 1681 gcatgaatac ggcaccaggt ggaagcaatt gcatgaattg tacaagagca agcaagaagc 1741 cttgaaacgt gaattgaaaa tggaagagga gaaattggaa gctcaaatgg aatatgcaag 1801 atatgagcat gaaacagaac ttctcagaca agaattgcgc aagcgtgaat ccgacaatga 1861 gcgcaagaag atggaatggg aaatgcgtga aaagcaagct gaagaaatgc gcaagcgcga 1921 cgaggaacaa gtgcgccgtc aacaaactga aatgcagtcg cgcatgatgc gccaagaaga 1981 agagatgcgt cgccgccaac aagaaaacac attgttcatg caagcccagc aattgaactc 2041 attgctggac cagcaagagg gcggtttcag tggcaactgc aataactttg atggctttgg 2101 aaacaatcca aatccatttg atttcagagg caataacaat ggtggcggta acggccccaa 2161 tggtcccaat ggccccagcg gccctagcgg cgctaacggt cccaatgggc caaataatcc 2221 ccaggatttc ggatttgaat ttggtggtaa ccaaaatcaa ccaagtggtg gagataatgg 2281 aaatcgcggc ggcggtggac cccaacgcgg tggaaacagt ggtggaaaca acaatccatg 2341 ggaacgcaga agacgtttct gagatgaaac taacgatgat tcacaaatat tgatcaataa 2401 ctaaaaatat tgcaacgcat aaaacacatt tgatcttcaa attagagaaa aagagaggca 2461 catacataca tacatacata catgtatatc gtcggtgtat ttgtgatgaa aacattcatt 2521 catctgttct gatctgcaag caaagtagat ttagttttaa gtttaaaaag gcaaacatgt 2581 ttcgacttgc atcaaagtta attcttagta cctatctacc tacttaattg aaattaacaa 2641 attgagccca actcttgcac acgctgtttg ttggtgatgg tacctccttg taagattgtg 2701 cttcttccct gcccgccctg cacatgcaaa aattacatgg cgcaacatca atgcttttca 2761 atacgtcttt ctcagtatcc atcaaactca gtatcaaaaa ca