Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS WP_017449365 626 aa linear BCT 21-JAN-2025 ACCESSION WP_017449365 VERSION WP_017449365.1 KEYWORDS RefSeq. SOURCE Vibrio parahaemolyticus ORGANISM Vibrio parahaemolyticus Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (residues 1 to 626) AUTHORS Upadhyay,A.A., Fleetwood,A.D., Adebali,O., Finn,R.D. and Zhulin,I.B. TITLE Cache Domains That are Homologous to, but Different from PAS Domains Comprise the Largest Superfamily of Extracellular Sensors in Prokaryotes JOURNAL PLoS Comput Biol 12 (4), e1004862 (2016) PUBMED 27049771 REMARK Publication Status: Online-Only REFERENCE 2 (residues 1 to 626) AUTHORS Lacal,J., Garcia-Fontana,C., Munoz-Martinez,F., Ramos,J.L. and Krell,T. TITLE Sensing of environmental signals: classification of chemoreceptors according to the size of their ligand binding regions JOURNAL Environ Microbiol 12 (11), 2873-2884 (2010) PUBMED 20738376 REFERENCE 3 (residues 1 to 626) AUTHORS Parkinson,J.S. TITLE Signaling mechanisms of HAMP domains in chemoreceptors and sensor kinases JOURNAL Annu Rev Microbiol 64, 101-122 (2010) PUBMED 20690824 REFERENCE 4 (residues 1 to 626) AUTHORS Hazelbauer,G.L., Falke,J.J. and Parkinson,J.S. TITLE Bacterial chemoreceptors: high-performance signaling in networked arrays JOURNAL Trends Biochem Sci 33 (1), 9-19 (2008) PUBMED 18165013 REFERENCE 5 (residues 1 to 626) AUTHORS Anantharaman,V. and Aravind,L. TITLE Cache - a signaling domain common to animal Ca(2+)-channel subunits and a class of prokaryotic chemotaxis receptors JOURNAL Trends Biochem Sci 25 (11), 535-537 (2000) PUBMED 11084361 COMMENT REFSEQ: This record represents a single, non-redundant, protein sequence which may be annotated on many different RefSeq genomes from the same, or different, species. ##Evidence-For-Name-Assignment-START## Evidence Category :: Conserved Domain (CDD) Evidence Accession :: Domain architecture ID 12982727 Evidence Source :: NCBI SPARCLE ##Evidence-For-Name-Assignment-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..626 /organism="Vibrio parahaemolyticus" /db_xref="taxon:670" Protein 1..626 /product="methyl-accepting chemotaxis protein" /GO_component="GO:0016020 - membrane [Evidence IEA]" /GO_function="GO:0004888 - transmembrane signaling receptor activity [Evidence IEA]" /GO_process="GO:0006935 - chemotaxis [Evidence IEA]" /GO_process="GO:0007165 - signal transduction [Evidence IEA]" /calculated_mol_wt=68270 Region 65..167 /region_name="PDC1_MCP_like" /note="first PDC (PhoQ/DcuS/CitA) domain of methyl-accepting chemotaxis proteins and similar domains; cd12913" /db_xref="CDD:350338" Region 124..626 /region_name="Tar" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; COG0840" /db_xref="CDD:440602" ORIGIN 1 mrntiklkiq iaiaviiaiv sgvqawvsvn qlheettstl nreiqnises tnryisdwla 61 irsdmmlane qiiagsddad rellltkrag kflsvyagfs dgaiaygdks eswpsdydpr 121 trpwyqdama qsgliitepy qdfdgsivvs fakafnqnkq gvlaadlavt diinevlniq 181 ldnngfaflv dgnnnlvayk deklsqkplt tlnpeltrdk manlaqhakl etitwpkqgd 241 qliyvaqvpn tdwslgvvqd kqmafasvse qvtftaiasi vmyliiaais tyvitrllrp 301 lqtlsdalse lsqgegdltq rieiermdei gelathvnqf laqmqsmlkn ivensqqlse 361 qaqqanelsa maagrvehqq ndvnqiatai hemsataaev ashaeltasa sqnsasacve 421 gqsviqknre aivslaeqvs daanvisele antqsinqil stiqgiaeqt nllalnaaie 481 aarageqgrg favvadevrv lsqrthgste eirtmietlq sntklavnsm qastsladts 541 vdyaqqahds ltsitnsite indmamqias aaeeqravse disrntqgik ddadviaeqs 601 lkssegarrm fntantmren isrfkv