Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS WP_011069362 406 aa linear BCT 25-APR-2022 flexneri]. ACCESSION WP_011069362 VERSION WP_011069362.1 KEYWORDS RefSeq. SOURCE Shigella flexneri ORGANISM Shigella flexneri Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella. REFERENCE 1 (residues 1 to 406) AUTHORS Andersen,N.M. and Douthwaite,S. TITLE YebU is a m5C methyltransferase specific for 16 S rRNA nucleotide 1407 JOURNAL J Mol Biol 359 (3), 777-786 (2006) PUBMED 16678201 COMMENT REFSEQ: This record represents a single, non-redundant, protein sequence which may be annotated on many different RefSeq genomes from the same, or different, species. ##Evidence-For-Name-Assignment-START## Evidence Category :: HMM Evidence Accession :: NF008898.0 Evidence Source :: NCBI Protein Cluster (PRK) Source Identifier :: PRK11933 ##Evidence-For-Name-Assignment-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..406 /organism="Shigella flexneri" /db_xref="taxon:623" gene 1..406 /gene="rsmF" Protein 1..406 /product="16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF" /EC_number="2.1.1.178" /GO_function="GO:0003723 - RNA binding [Evidence IEA]" /GO_function="GO:0008649 - rRNA methyltransferase activity [Evidence IEA]" /GO_process="GO:0001510 - RNA methylation [Evidence IEA]" /calculated_mol_wt=44798 Region 1..406 /region_name="yebU" /note="rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed; PRK11933" /db_xref="CDD:183387" ORIGIN 1 mreampstls fddflaacqr plrrsirvnt lkisvadflq ltapygwtlt pipwceegfw 61 ierdnedalp lgsttehlsg lfyiqeassm lpvaalfadg napqrvmdva aapgskttqi 121 aarmnnegai lanefsaswv kvlhanisrc gisnvalthf ggrvfgaavp emfdaillda 181 pcsgegvvrk dpdalknwsp esnqeiaatq relidsafha lrpggtlvys tctlnreene 241 avcrwlkety pdeveflplg dlfpgankal teegflhvfp qiydcegffv arlrktqaip 301 alpapkykvg nfpfspvkdr eagqirqaaa svglnwdgnl rlwqrdkelw lfpvgieali 361 gkvrfsrlgi klaethnkgy rwqheaviah aspdnvnafe ltpqea