Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS WP_010989916 1612 aa linear BCT 18-FEB-2025 ACCESSION WP_010989916 VERSION WP_010989916.1 KEYWORDS RefSeq. SOURCE Listeria monocytogenes ORGANISM Listeria monocytogenes Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria. REFERENCE 1 (residues 1 to 1612) AUTHORS Foster,T.J. TITLE The MSCRAMM Family of Cell-Wall-Anchored Surface Proteins of Gram-Positive Cocci JOURNAL Trends Microbiol 27 (11), 927-941 (2019) PUBMED 31375310 REFERENCE 2 (residues 1 to 1612) AUTHORS Foster,T.J. TITLE Surface Proteins of Staphylococcus aureus JOURNAL Microbiol Spectr 7 (4) (2019) PUBMED 31267926 REFERENCE 3 (residues 1 to 1612) AUTHORS Deivanayagam,C.C., Wann,E.R., Chen,W., Carson,M., Rajashankar,K.R., Hook,M. and Narayana,S.V. TITLE A novel variant of the immunoglobulin fold in surface adhesins of Staphylococcus aureus: crystal structure of the fibrinogen-binding MSCRAMM, clumping factor A JOURNAL EMBO J 21 (24), 6660-6672 (2002) PUBMED 12485987 REFERENCE 4 (residues 1 to 1612) AUTHORS Smith,D.K. and Xue,H. TITLE Sequence profiles of immunoglobulin and immunoglobulin-like domains JOURNAL J Mol Biol 274 (4), 530-545 (1997) PUBMED 9417933 REFERENCE 5 (residues 1 to 1612) AUTHORS Bork,P., Holm,L. and Sander,C. TITLE The immunoglobulin fold. Structural classification, sequence patterns and common core JOURNAL J Mol Biol 242 (4), 309-320 (1994) PUBMED 7932691 REFERENCE 6 (residues 1 to 1612) AUTHORS Patti,J.M., Allen,B.L., McGavin,M.J. and Hook,M. TITLE MSCRAMM-mediated adherence of microorganisms to host tissues JOURNAL Annu Rev Microbiol 48, 585-617 (1994) PUBMED 7826020 COMMENT REFSEQ: This record represents a single, non-redundant, protein sequence which may be annotated on many different RefSeq genomes from the same, or different, species. ##Evidence-For-Name-Assignment-START## Evidence Category :: Conserved Domain (CDD) Evidence Accession :: Domain architecture ID 11471690 Evidence Source :: NCBI SPARCLE ##Evidence-For-Name-Assignment-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..1612 /organism="Listeria monocytogenes" /db_xref="taxon:1639" Protein 1..1612 /product="MSCRAMM family protein" /GO_component="GO:0005576 - extracellular region [Evidence IEA]" /GO_function="GO:0005515 - protein binding [Evidence IEA]" /calculated_mol_wt=174942 Region <30..353 /region_name="ClfA" /note="Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis]; COG4932" /db_xref="CDD:443959" Region 49..116 /region_name="SpaA" /note="Prealbumin-like fold domain; pfam17802" /db_xref="CDD:465513" Region 442..549 /region_name="Collagen_bind" /note="Collagen binding domain; pfam05737" /db_xref="CDD:283410" Region 971..1582 /region_name="ClfA" /note="Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis]; COG4932" /db_xref="CDD:443959" ORIGIN 1 mknirhwkkl viamvigllv fqnvspvlat mtddetantt lkiikedkdt kekingstfe 61 iknketsets dltisangea tmdsllpgdy lvkekvaakg yaldekeysv tltekeevit 121 svsakvqeet tkeaatpvkk atqnanlkaa itdnifnkvt lkdgngdein tsdriqngsg 181 vvlnmnfafs gknykagdtf ttvlpdafnf gnknlsgnfl psteaewsld vttreltitf 241 lkdgiqegdy dvnistafkv ftsteetiqe vvfktagkdt iyqievvpvv nypttvaita 301 npgvvnptkg qvdakfnltk ekdakgelkl tdytsggttt idkdsikvys sdvsaggtfi 361 gtkkllvegt dytltysats ltvtlnggla gkgyqvtydr tinkpsdsls ymstqaytvg 421 dagtlssnsa yvyltmtnyk hlekkatyng stqsidwkin fnfdqdeisp stvltdvlad 481 ndveyvadsl kikrvtfnat ngspivgsda ssdwttsais angnfnltyk ntntnayeit 541 ystkitdfsd rkikneitde ngvsadatia iqpdllkkea gtidyfnntm twkitansdr 601 ikmgnlnitd efstgvkalk sytvraytdn tnsvlltegk dytidkdvtp agfyiqligd 661 yastdkkivv dfvtdidlsd vtktidnkas isyydggiik yvdevtasmt pdpgmmtngg 721 kygsynsttg nidwivsvna maknydnlif ddaiptglty vegslqyrnv astsemmnly 781 iplnsvgtva ktgdknyptk vdttgnklhl efanlensrv fikystkpne nwyfysyvqn 841 takvsdngvg eksysyqaya sklfnamtkt atidpsfdnk vnwivtlnni sadrpinnpt 901 itdtmktgtt gaqvvkssfk vmnettgedi dskyydityt dnnftiqfkd ykatapikvt 961 ystislmsgl vsntattasp dygslpmtyk srttsispaf tigsgsgtat igsleitkvd 1021 kkdnskkltg akfqlytleg dkagqeattd sdgkivmdgl qsgkyklvet eaptgytisd 1081 eykdgkeitv tadiatsvti enteqtgsvv llkedsatkd aiagaefelq nadgtkvadn 1141 lvsnadgkie vtdlapgdyq fvetkaptgy vldgaptkft vefnqeaavi vtkentaktg 1201 svvltkedsv skatlsgaef elqnatgtkv kdnlttnadg klevtdlapg dykfvetkap 1261 tgyeldatpv tftiefnqat avnvtkenva ktgsvvltkl dsksrsnlag aefelqtklg 1321 vslkdkvvte angqlqidnl apgdyqlvet kaptgydlda tpveftiefn qkapiqvtkt 1381 ntmstgsvvl tktdgetkal lanatfklvd ednnvtenlt tdasgkleit nlapgdyqli 1441 etkapagyel dtvpvdvkit fdqketlqvt ktnlktvvsg kviaefvdtk gnvlaekeih 1501 tgivgdkyat kakdikgykl tkqptnkegv fketeqkvtf vyeknkapiv vnpdkpvtpv 1561 kptkpvdpak kptvktslps tgdespygii ftglfasfmg lfllrkskki nd