Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS WP_009315212 803 aa linear BCT 03-JUN-2024 ACCESSION WP_009315212 VERSION WP_009315212.1 KEYWORDS RefSeq. SOURCE Pseudomonas ORGANISM Pseudomonas Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae. REFERENCE 1 (residues 1 to 803) AUTHORS Korotkov,K.V., Pardon,E., Steyaert,J. and Hol,W.G. TITLE Crystal structure of the N-terminal domain of the secretin GspD from ETEC determined with the assistance of a nanobody JOURNAL Structure 17 (2), 255-265 (2009) PUBMED 19217396 REFERENCE 2 (residues 1 to 803) AUTHORS Iwobi,A., Heesemann,J., Garcia,E., Igwe,E., Noelting,C. and Rakin,A. TITLE Novel virulence-associated type II secretion system unique to high-pathogenicity Yersinia enterocolitica JOURNAL Infect Immun 71 (4), 1872-1879 (2003) PUBMED 12654803 COMMENT REFSEQ: This record represents a single, non-redundant, protein sequence which may be annotated on many different RefSeq genomes from the same, or different, species. ##Evidence-For-Name-Assignment-START## Evidence Category :: HMM Evidence Accession :: TIGR02517.1 Evidence Source :: JCVI ##Evidence-For-Name-Assignment-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..803 /organism="Pseudomonas" /db_xref="taxon:286" gene 1..803 /gene="gspD" Protein 1..803 /product="type II secretion system secretin GspD" /GO_component="GO:0015627 - type II protein secretion system complex [Evidence IEA]" /GO_component="GO:0019867 - outer membrane [Evidence IEA]" /GO_process="GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]" /calculated_mol_wt=83720 Region 104..741 /region_name="type_II_gspD" /note="type II secretion system protein D; TIGR02517" /db_xref="CDD:274175" ORIGIN 1 mrqsafhhar rrwpvlgval gallvaacse tpkvpgvppa deevgrplss vrsgaplrsa 61 dvrerpqaeq arralsagrg varsggvapv sataaelgeq pvslnfvdte veavvralsr 121 atgrqflvdp rvkgkltlvs egqvpartay rmltsalrmq gfsvvdvdgv sqvvpeadak 181 llggpvygad rpaangmvtr tfrlryenav nlipvlrpiv aqnnpinayp gnntvvvtdy 241 aenldrvagi iasidipsas dtdvvpiqng iavdiastvs elldsqgsgg aeqgqktvvl 301 adprsnsivi rspspertql ardligklds vqsnpgnlhv vylrnaqatr laqalrglit 361 gdsggegneg dqqrarlsgg gmlgggnsgt gsqglgssgn ttgsgssglg gsnrsggayg 421 amgsgqggag pgamgeensa fsaggvtvqa dattntllis apeplyrnlr evidlldqrr 481 aqvviesliv evseddssef giqwqagnlg gngvfggvnf gqsalntagk ntidvlpkgl 541 niglvdgtvd ipgigkildl kvlaralksr ggtnvlstpn lltldnesas imvgqtipfv 601 sgqyvtdggg tsnnpfqtiq redvglklni rpqiseggtv kldvyqevss vderastaag 661 vvtnkraidt sillddgqim vlggllqdnv qdntdgvpgl sslpgvgslf ryqkrsrtkt 721 nlmvflrpyi vrdaaagrsi tlnrydfirr aqqrvqprhd wsvgdmqapv lppaqqgipq 781 aaydlrpspr plravplgea apl