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MULTISPECIES: 50S ribosomal protein L25 [Vibrio].


LOCUS       WP_005529240              92 aa            linear   BCT 26-FEB-2020
ACCESSION   WP_005529240
VERSION     WP_005529240.1
KEYWORDS    RefSeq.
SOURCE      Vibrio
  ORGANISM  Vibrio
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Gongadze,G.M., Korepanov,A.P., Stolboushkina,E.A., Zelinskaya,N.V.,
            Korobeinikova,A.V., Ruzanov,M.V., Eliseev,B.D., Nikonov,O.S.,
            Nikonov,S.V., Garber,M.B. and Lim,V.I.
  TITLE     The crucial role of conserved intermolecular H-bonds inaccessible
            to the solvent in formation and stabilization of the TL5.5 SrRNA
            complex
  JOURNAL   J. Biol. Chem. 280 (16), 16151-16156 (2005)
   PUBMED   15718233
REFERENCE   2  (residues 1 to 92)
  AUTHORS   Fedorov,R., Meshcheryakov,V., Gongadze,G., Fomenkova,N.,
            Nevskaya,N., Selmer,M., Laurberg,M., Kristensen,O.,
            Al-Karadaghi,S., Liljas,A., Garber,M. and Nikonov,S.
  TITLE     Structure of ribosomal protein TL5 complexed with RNA provides new
            insights into the CTC family of stress proteins
  JOURNAL   Acta Crystallogr. D Biol. Crystallogr. 57 (Pt 7), 968-976 (2001)
   PUBMED   11418764
REFERENCE   3  (residues 1 to 92)
  AUTHORS   Lu,M. and Steitz,T.A.
  TITLE     Structure of Escherichia coli ribosomal protein L25 complexed with
            a 5S rRNA fragment at 1.8-A resolution
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 97 (5), 2023-2028 (2000)
   PUBMED   10696113
REFERENCE   4  (residues 1 to 92)
  AUTHORS   Stoldt,M., Wohnert,J., Gorlach,M. and Brown,L.R.
  TITLE     The NMR structure of Escherichia coli ribosomal protein L25 shows
            homology to general stress proteins and glutaminyl-tRNA synthetases
  JOURNAL   EMBO J. 17 (21), 6377-6384 (1998)
   PUBMED   9799245
REFERENCE   5  (residues 1 to 92)
  AUTHORS   Uemura,Y., Isono,S. and Isono,K.
  TITLE     Cloning, characterization, and physical location of the rplY gene
            which encodes ribosomal protein L25 in Escherichia coli K12
  JOURNAL   Mol. Gen. Genet. 226 (1-2), 341-344 (1991)
   PUBMED   2034228
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF004612.1
            Evidence Source    :: NCBI Protein Cluster (PRK)
            Source Identifier  :: PRK05943
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Vibrio"
                     /db_xref="taxon:662"
     gene            1..92
                     /gene="rplY"
     Protein         1..92
                     /product="50S ribosomal protein L25"
                     /GO_component="GO:0005840 - ribosome [Evidence IEA]"
                     /GO_function="GO:0003735 - structural constituent of
                     ribosome [Evidence IEA]"
                     /GO_process="GO:0006412 - translation [Evidence IEA]"
                     /calculated_mol_wt=10226
     Region          1..92
                     /region_name="PRK05943"
                     /note="50S ribosomal protein L25; Reviewed"
                     /db_xref="CDD:180318"
     Site            order(8,16..18,20,30..32,36,73..74,76,86,88,90)
                     /site_type="other"
                     /note="5S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:198379"
     Site            order(32,57,69,73,90..91)
                     /site_type="other"
                     /note="CTC domain interface [polypeptide binding]"
                     /db_xref="CDD:198379"
     Site            order(71..72,75,82,90)
                     /site_type="other"
                     /note="L16 interface [polypeptide binding]"
                     /db_xref="CDD:198379"
ORIGIN      
        1 mkfeavvrte lgkgasrrlr hagkfpavvy ggeeaavaiv lnhddivnqm dkpefyegiv
       61 lvidgaevkv kpqdvqrhaf kpkvehmdfi ri