Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

ribonuclease J [Listeria monocytogenes].


LOCUS       WP_003721939             555 aa            linear   BCT 31-DEC-2024
ACCESSION   WP_003721939
VERSION     WP_003721939.1
KEYWORDS    RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (residues 1 to 555)
  AUTHORS   Li de la Sierra-Gallay,I., Zig,L., Jamalli,A. and Putzer,H.
  TITLE     Structural insights into the dual activity of RNase J
  JOURNAL   Nat Struct Mol Biol 15 (2), 206-212 (2008)
   PUBMED   18204464
REFERENCE   2  (residues 1 to 555)
  AUTHORS   Aravind,L.
  TITLE     An evolutionary classification of the metallo-beta-lactamase fold
            proteins
  JOURNAL   In Silico Biol 1 (2), 69-91 (1999)
   PUBMED   11471246
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11426779
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Listeria monocytogenes"
                     /db_xref="taxon:1639"
     Protein         1..555
                     /product="ribonuclease J"
                     /EC_number="3.1.-.-"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
                     /GO_function="GO:0004534 - 5'-3' RNA exonuclease activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006364 - rRNA processing [Evidence IEA]"
                     /GO_process="GO:0006396 - RNA processing [Evidence IEA]"
                     /calculated_mol_wt=61779
     Region          13..555
                     /region_name="RnjA"
                     /note="mRNA degradation ribonuclease J1/J2 [Translation,
                     ribosomal structure and biogenesis]; COG0595"
                     /db_xref="CDD:440360"
ORIGIN      
        1 mtikkaknik iiplggvdes gknlyvveid edifildagl mfpenellgi divipdfkyl
       61 eenkdrvkai flthghedai galpyllqki kapvygtelt ialaksalke hrklrfknfh
      121 vvneettlsf skidvsffrt thtipdsvgi vletsegsiv ytgdfkfdqs akdgyasdls
      181 hiaefgekgv lallsdssea ehpgttssds lieeeirhaf rmadgriiva cvasnlirlq
      241 qvldasvatk rkvaivgkel ervfeiagsl gkivieedli vplkelkkys ddeitiietg
      301 nlgepiqslq lmtkgnhpql nikpgdtvyi tttpspslet mmaktmdmly kagakvltms
      361 nnlfisghas qedlklminl lkpryfvpvh geyrmlisha klahevgmak sevfivgkge
      421 ileykndkmt agnrvysgnt lidglgvgdv gnivlrdrkl lsedgifivv vtlnrkskti
      481 tsgpeiisrg fiyvresehl ieesskvvtk iveknlqetg fewaklkqdi rdqlnrylfe
      541 qtkrrpmilp iimev