Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

type VI secretion system baseplate subunit TssF [Pseudomonas


LOCUS       WP_003120358             526 aa            linear   BCT 12-AUG-2024
            aeruginosa].
ACCESSION   WP_003120358
VERSION     WP_003120358.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 526)
  AUTHORS   Shalom,G., Shaw,J.G. and Thomas,M.S.
  TITLE     In vivo expression technology identifies a type VI secretion system
            locus in Burkholderia pseudomallei that is induced upon invasion of
            macrophages
  JOURNAL   Microbiology (Reading) 153 (Pt 8), 2689-2699 (2007)
   PUBMED   17660433
REFERENCE   2  (residues 1 to 526)
  AUTHORS   Mougous,J.D., Cuff,M.E., Raunser,S., Shen,A., Zhou,M.,
            Gifford,C.A., Goodman,A.L., Joachimiak,G., Ordonez,C.L., Lory,S.,
            Walz,T., Joachimiak,A. and Mekalanos,J.J.
  TITLE     A virulence locus of Pseudomonas aeruginosa encodes a protein
            secretion apparatus
  JOURNAL   Science 312 (5779), 1526-1530 (2006)
   PUBMED   16763151
REFERENCE   3  (residues 1 to 526)
  AUTHORS   Pukatzki,S., Ma,A.T., Sturtevant,D., Krastins,B., Sarracino,D.,
            Nelson,W.C., Heidelberg,J.F. and Mekalanos,J.J.
  TITLE     Identification of a conserved bacterial protein secretion system in
            Vibrio cholerae using the Dictyostelium host model system
  JOURNAL   Proc Natl Acad Sci U S A 103 (5), 1528-1533 (2006)
   PUBMED   16432199
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: TIGR03359.1
            Evidence Source    :: JCVI
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     gene            1..526
                     /gene="tssF"
     Protein         1..526
                     /product="type VI secretion system baseplate subunit TssF"
                     /GO_process="GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=59582
     Region          1..526
                     /region_name="T6SS_TssF"
                     /note="Type VI secretion system, TssF; cl15462"
                     /db_xref="CDD:472810"
ORIGIN      
        1 mmhllwpnym rplpafsilq fdpltrpgga lrverdtpve srpvgevacr frtcyatevl
       61 plvlealnys vtgegallgl rlamncdghl gelglsrlrl hlageryisq mlylcllrnl
      121 esiqliplda hgrpldgvag kpmsfrltge rvqpvgfaed ealipyplnt frgyrylqey
      181 fafqdkflfv dvdgldllga lpeetlkqvr glelrfdirk sgiqrlhptl envklyctpv
      241 anlfrhdalp irldgkqdey llmpaeysle dcgvfsvegv tgwrpgglgy qayvpfesfe
      301 hdpsfdvpea rphysvrqrt sllhdgldty lsfgirhpeq ietlsveltc tnqnlpqrlr
      361 lgdicvaceg tpeflgfrni tpatpsyapp lnrdflwkli snmslnylsl anvdalkvil
      421 etydlpryyd qhaakvskrl lgglkavrhe hvdrlhrglp lrglrtelti dpegyigegd
      481 lfvfasvlne ffalyasins yhelrvrstq gdvyqwkprm glqpll