Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS WP_003119873 567 aa linear BCT 27-JUL-2024 ACCESSION WP_003119873 VERSION WP_003119873.1 KEYWORDS RefSeq. SOURCE Pseudomonas ORGANISM Pseudomonas Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae. REFERENCE 1 (residues 1 to 567) AUTHORS Muto,Y. and Yokoyama,S. TITLE Structural insight into RNA recognition motifs: versatile molecular Lego building blocks for biological systems JOURNAL Wiley Interdiscip Rev RNA 3 (2), 229-246 (2012) PUBMED 22278943 REFERENCE 2 (residues 1 to 567) AUTHORS Gustafson,E.A. and Wessel,G.M. TITLE DEAD-box helicases: posttranslational regulation and function JOURNAL Biochem Biophys Res Commun 395 (1), 1-6 (2010) PUBMED 20206133 REFERENCE 3 (residues 1 to 567) AUTHORS Clery,A., Blatter,M. and Allain,F.H. TITLE RNA recognition motifs: boring? Not quite JOURNAL Curr Opin Struct Biol 18 (3), 290-298 (2008) PUBMED 18515081 COMMENT REFSEQ: This record represents a single, non-redundant, protein sequence which may be annotated on many different RefSeq genomes from the same, or different, species. ##Evidence-For-Name-Assignment-START## Evidence Category :: Conserved Domain (CDD) Evidence Accession :: Domain architecture ID 11424260 Evidence Source :: NCBI SPARCLE ##Evidence-For-Name-Assignment-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..567 /organism="Pseudomonas" /db_xref="taxon:286" Protein 1..567 /product="DEAD/DEAH box helicase" /EC_number="3.6.4.-" /GO_function="GO:0003676 - nucleic acid binding [Evidence IEA]" /GO_function="GO:0003723 - RNA binding [Evidence IEA]" /GO_function="GO:0004386 - helicase activity [Evidence IEA]" /GO_function="GO:0005524 - ATP binding [Evidence IEA]" /GO_function="GO:0016887 - ATP hydrolysis activity [Evidence IEA]" /calculated_mol_wt=61977 Region 19..415 /region_name="SrmB" /note="Superfamily II DNA and RNA helicase [Replication, recombination and repair]; COG0513" /db_xref="CDD:440279" Region 492..563 /region_name="DbpA" /note="DbpA RNA binding domain; pfam03880" /db_xref="CDD:461082" ORIGIN 1 mglcgcirgk pmtqetvgfa algihpnvla aivavgyeep spiqaqsipl ileghdmigq 61 aqtgtgktaa falpllsrid psrrepqmlv lvptrelalq vatacetysk qlpgvgvvav 121 yggapmgpql kalrqgaqil vatpgrlcdh lrrdekllat vqrlvldead emlklgfmdd 181 levifealpe srqtvlfsat lpasirgiae rhlkqpkhvk iaaktqtvar ieqvhlmvha 241 dqkagsiqrl leveqfdali afvrtkqatl dyaellerqg yraaalngdm pqaqrervie 301 slkdgsldiv iatdvaargl dvprithvln idmpydpesy vhrigrtgra gregralllv 361 tprerrmlqv iervtgqkvg evrlpdaetv learlarlaa sltplldsav eqrgavrdel 421 crrlgcdaet laaallarlt agkaldlesv rreqpltpsa preradrger gerpersger 481 rpmappsegr arcrtalgar dgvaaknllg ailnegglsr edigriqird tfslielpea 541 nlerlltklk dtrvagkalr lrryred