Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: alpha-ketoglutarate-dependent dioxygenase AlkB family


LOCUS       WP_003115462             200 aa            linear   BCT 23-DEC-2024
            protein [Pseudomonas].
ACCESSION   WP_003115462
VERSION     WP_003115462.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 200)
  AUTHORS   Guengerich,F.P.
  TITLE     Introduction: Metals in Biology: alpha-Ketoglutarate/Iron-Dependent
            Dioxygenases
  JOURNAL   J Biol Chem 290 (34), 20700-20701 (2015)
   PUBMED   26152720
REFERENCE   2  (residues 1 to 200)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The DNA-repair protein AlkB, EGL-9, and leprecan define new
            families of 2-oxoglutarate- and iron-dependent dioxygenases
  JOURNAL   Genome Biol 2 (3), RESEARCH0007 (2001)
   PUBMED   11276424
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10006968
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..200
                     /product="alpha-ketoglutarate-dependent dioxygenase AlkB
                     family protein"
                     /EC_number="1.14.11.-"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0008198 - ferrous iron binding [Evidence
                     IEA]"
                     /GO_function="GO:0016706 - 2-oxoglutarate-dependent
                     dioxygenase activity [Evidence IEA]"
                     /calculated_mol_wt=23088
     Region          2..198
                     /region_name="AlkB"
                     /note="Alkylated DNA repair dioxygenase AlkB [Replication,
                     recombination and repair]; COG3145"
                     /db_xref="CDD:442379"
ORIGIN      
        1 mdlfadaplt lpdadlrylp hwldaplasa wllrleqetp weqpilrihg eehptprlva
       61 wygdpdaayr ysgqvhrplp wtallgeire rverevgqrv ngvllnyyrd gqdsmgwhsd
      121 depelrrdpl vaslslggsr rfdlrrkgqt riahslelth gsllvmrgat qhhwqhqvak
      181 trrscmprln ltfrlvypqp