Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: pyocin knob domain-containing protein [Pseudomonas].


LOCUS       WP_003115342             363 aa            linear   BCT 20-NOV-2023
ACCESSION   WP_003115342
VERSION     WP_003115342.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 15331322
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..363
                     /product="pyocin knob domain-containing protein"
                     /calculated_mol_wt=38544
     Region          149..225
                     /region_name="pyocin_knob"
                     /note="knob domain of R1 and R2 pyocins and similar
                     domains; cd19958"
                     /db_xref="CDD:410997"
     Site            order(149,164..166,183,185,187..190,197..199,201..203,
                     207..208,210..212,214,219,222..225)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:410997"
ORIGIN      
        1 mawhskgsvs vtlnseavlg natdfianvr tgdafrgpdg rwyeitnvts atvisikpny
       61 qgatasgqvy avvpihgysk nladqfrdin nqwgatlagi kpwavsstgq qaqadmgisa
      121 vgralnnast panalsylgg vapnqmgwag namntadlds ltvsglyahg tavpspvnna
      181 qgyvlhmqhg npdfavqqwy qlnsatgqym rikaggnwsr wvlqysqfnl vglasfdasn
      241 npsgaiiqrg gtvgfneyvr yadgtqicwg ntttnvgatm ayqpagtlsf yitpvayswg
      301 fpvsfsrpps vmvnpmraag nnasrpwgst msvtetlfsw ygydtasvas gmaasyvamg
      361 rwn