MULTISPECIES: transcription-repair coupling factor [Pseudomonas].

LOCUS       WP_003113980            1148 aa            linear   BCT 20-NOV-2023
ACCESSION   WP_003113980
VERSION     WP_003113980.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 1148)
  AUTHORS   Deaconescu,A.M., Savery,N. and Darst,S.A.
  TITLE     The bacterial transcription repair coupling factor
  JOURNAL   Curr Opin Struct Biol 17 (1), 96-102 (2007)
   PUBMED   17239578
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF007966.0
            Evidence Source    :: NCBI Protein Cluster (PRK)
            Source Identifier  :: PRK10689
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     gene            1..1148
                     /gene="mfd"
     Protein         1..1148
                     /product="transcription-repair coupling factor"
                     /EC_number="3.6.1.-"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0003684 - damaged DNA binding [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006281 - DNA repair [Evidence IEA]"
                     /calculated_mol_wt=128665
     Region          12..1145
                     /region_name="Mfd"
                     /note="Transcription-repair coupling factor (superfamily
                     II helicase) [Replication, recombination and repair,
                     Transcription]; COG1197"
                     /db_xref="CDD:440810"
ORIGIN      
        1 msvlrlpslp asagkqhwgn lpgaalslav aeaassakrf tllltadsqn aerleqelrf
       61 fapdlpvlhf pdwetlpydv fsphqdiisq riaalyqlpq lkhgvlvvpi stalhrlapt
      121 rfllgsslvl dvgqkldver mrlrlegagy rcvdtvyehg efavrgalid lfpmgselpf
      181 ridlfddeie tlrtfdpetq rsidkvesir llparefpln keavtgfrgr frerfdvdyr
      241 rcpiyqdlas gltpsgieyy lplffeetat lfdylpqdtq vfslpgieqa aeqfwndvrs
      301 ryedrrvdpe rpllppaevf lpvedcfarl knwprvvasq edvepgvgre rfpalplpnl
      361 aieakaaepl aalrrfieef pgrvlfcaes agrrevllel larlklrpee vdgwpaflas
      421 qarlaisiap ldegllldhp alalvaespl fgqrvmqrrr rektrdggda viknltelre
      481 gapvvhidhg vgrylglitl evdnqqaefl mlqyaedakl yvpvanlhli arytgaddal
      541 aplhrlgset wqkakrkaae qvrdvaaell diyarraare gfafkdpqad yatfsagfpf
      601 eetpdqqsai eavvadmlap rpmdrlvcgd vgfgktevam raafvavhsg kqvavlvptt
      661 llaqqhynsf rdrfadwpvs vevmsrfksa kevenaarll aegkidilig thkllqedvk
      721 fanlglvvid eehrfgvrqk eqlkalrsev diltltatpi prtlnmavsg mrdlsiiatp
      781 parrlsvrtf vmeqqnavik eallrellrg gqvyylhnev ktiekcardl aelvpearig
      841 ighgqmhere leqvmsdfyh krfnvlvast iietgidvps antilierad kfglaqlhql
      901 rgrvgrshhq ayaylltppr rqmtpdaekr leaianaqdl gagfvlathd leirgagell
      961 gdgqsgqiqa vgftlymeml eravkairkg eqpnleqplg ggpevnlrvp alipedylpd
     1021 vharlilykr ianapdeegl relqvemidr fgllpdpakn lmrltllklq aeklgilkvd
     1081 agpqggrief aadtqvdplv likliqgqpn rykfegatlf rfqvpmerpe erfntlealf
     1141 erltpqtt