Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

LysR family transcriptional regulator [Pseudomonas aeruginosa].


LOCUS       WP_003113629             301 aa            linear   BCT 24-MAR-2023
ACCESSION   WP_003113629
VERSION     WP_003113629.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 301)
  AUTHORS   Maddocks,S.E. and Oyston,P.C.F.
  TITLE     Structure and function of the LysR-type transcriptional regulator
            (LTTR) family proteins
  JOURNAL   Microbiology (Reading) 154 (Pt 12), 3609-3623 (2008)
   PUBMED   19047729
REFERENCE   2  (residues 1 to 301)
  AUTHORS   Schell,M.A.
  TITLE     Molecular biology of the LysR family of transcriptional regulators
  JOURNAL   Annu Rev Microbiol 47, 597-626 (1993)
   PUBMED   8257110
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10444048
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..301
                     /product="LysR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /calculated_mol_wt=33391
     Region          15..68
                     /region_name="HTH_1"
                     /note="Bacterial regulatory helix-turn-helix protein, lysR
                     family; pfam00126"
                     /db_xref="CDD:459683"
     Region          99..298
                     /region_name="PBP2_Nitroaromatics_like"
                     /note="The C-terminal substrate binding domain of
                     LysR-type transcriptional regulators that involved in the
                     catabolism of nitroaromatic/naphthalene compounds and that
                     of related regulators; contains the type 2 periplasmic
                     binding fold; cd08417"
                     /db_xref="CDD:176109"
     Site            order(105,107..108,112,170,207,274)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:176109"
     Site            order(106,109..110,113..114,117..118,120..121,124..125,
                     127..131,133,196,224..228,231..232,235..236,239)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176109"
ORIGIN      
        1 mklnlqqldl nlllvfdalm rernlsraai rlhrsqpavs nalarlreql dqplfrraak
       61 gleptaaala lyvpvrqalh llqaglgsqe tfdphtartf rltmndyaql rllpglvtrl
      121 ktlaprvtle vrpdegasip aqlasgeldl aidylyfdep elayrpvgee rlvvigrqgh
      181 pafrggldra ayeaaqhvsi lprvgrgspl eivlgsarvq rqvqllvphy ltipaivast
      241 ellgtvprrl aerfagshgl qladvpfema pvqvnliwhr qqeatpglqw lreqivqieq
      301 g