Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

SycD/LcrH family type III secretion system chaperone PcrH


LOCUS       WP_003113548             167 aa            linear   BCT 06-APR-2020
            [Pseudomonas aeruginosa].
ACCESSION   WP_003113548
VERSION     WP_003113548.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Liu,B., Zheng,D., Jin,Q., Chen,L. and Yang,J.
  TITLE     VFDB 2019: a comparative pathogenomic platform with an interactive
            web interface
  JOURNAL   Nucleic Acids Res. 47 (D1), D687-D692 (2019)
   PUBMED   30395255
REFERENCE   2  (residues 1 to 167)
  AUTHORS   Portaliou,A.G., Tsolis,K.C., Loos,M.S., Zorzini,V. and Economou,A.
  TITLE     Type III Secretion: Building and Operating a Remarkable Nanomachine
  JOURNAL   Trends Biochem. Sci. 41 (2), 175-189 (2016)
   PUBMED   26520801
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: BlastRule
            Evidence Accession :: NBR011402
            Evidence Source    :: NCBI
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     gene            1..167
                     /gene="pcrH"
     Protein         1..167
                     /product="SycD/LcrH family type III secretion system
                     chaperone PcrH"
                     /calculated_mol_wt=18219
     Region          20..153
                     /region_name="LcrH_SycD"
                     /note="type III secretion low calcium response chaperone
                     LcrH/SycD; TIGR02552"
                     /db_xref="CDD:274197"
     Site            order(37,40..41,44..45,47,71,74..75,78..79,81..82,105,
                     108..109,112..113,116)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          37..64
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          69..99
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          104..127
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mnqptpsdtd qqqaleaflr dggtlamlrg lsedtleqly algfnqyqag kwddaqkifq
       61 alcmldhyda ryflglgacr qslglyeqal qsysygalmd ineprfpfha aechlqlgdl
      121 dgaesgfysa ralaaaqpah ealaaragam leavtarkdr ayesdna