Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS WP_003113172 266 aa linear BCT 23-DEC-2024 [Pseudomonas]. ACCESSION WP_003113172 VERSION WP_003113172.1 KEYWORDS RefSeq. SOURCE Pseudomonas ORGANISM Pseudomonas Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae. REFERENCE 1 (residues 1 to 266) AUTHORS Kallberg,Y., Oppermann,U. and Persson,B. TITLE Classification of the short-chain dehydrogenase/reductase superfamily using hidden Markov models JOURNAL FEBS J 277 (10), 2375-2386 (2010) PUBMED 20423462 REFERENCE 2 (residues 1 to 266) AUTHORS Persson,B., Kallberg,Y., Bray,J.E., Bruford,E., Dellaporta,S.L., Favia,A.D., Duarte,R.G., Jornvall,H., Kavanagh,K.L., Kedishvili,N., Kisiela,M., Maser,E., Mindnich,R., Orchard,S., Penning,T.M., Thornton,J.M., Adamski,J. and Oppermann,U. TITLE The SDR (short-chain dehydrogenase/reductase and related enzymes) nomenclature initiative JOURNAL Chem Biol Interact 178 (1-3), 94-98 (2009) PUBMED 19027726 REFERENCE 3 (residues 1 to 266) AUTHORS Kavanagh,K.L., Jornvall,H., Persson,B. and Oppermann,U. TITLE Medium- and short-chain dehydrogenase/reductase gene and protein families : the SDR superfamily: functional and structural diversity within a family of metabolic and regulatory enzymes JOURNAL Cell Mol Life Sci 65 (24), 3895-3906 (2008) PUBMED 19011750 REFERENCE 4 (residues 1 to 266) AUTHORS Ladenstein,R., Winberg,J.O. and Benach,J. TITLE Medium- and short-chain dehydrogenase/reductase gene and protein families : Structure-function relationships in short-chain alcohol dehydrogenases JOURNAL Cell Mol Life Sci 65 (24), 3918-3935 (2008) PUBMED 19011748 REFERENCE 5 (residues 1 to 266) AUTHORS Oppermann,U., Filling,C., Hult,M., Shafqat,N., Wu,X., Lindh,M., Shafqat,J., Nordling,E., Kallberg,Y., Persson,B. and Jornvall,H. TITLE Short-chain dehydrogenases/reductases (SDR): the 2002 update JOURNAL Chem Biol Interact 143-144, 247-253 (2003) PUBMED 12604210 REFERENCE 6 (residues 1 to 266) AUTHORS Jornvall,H., Persson,B., Krook,M., Atrian,S., Gonzalez-Duarte,R., Jeffery,J. and Ghosh,D. TITLE Short-chain dehydrogenases/reductases (SDR) JOURNAL Biochemistry 34 (18), 6003-6013 (1995) PUBMED 7742302 COMMENT REFSEQ: This record represents a single, non-redundant, protein sequence which may be annotated on many different RefSeq genomes from the same, or different, species. ##Evidence-For-Name-Assignment-START## Evidence Category :: Conserved Domain (CDD) Evidence Accession :: Domain architecture ID 11416738 Evidence Source :: NCBI SPARCLE ##Evidence-For-Name-Assignment-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..266 /organism="Pseudomonas" /db_xref="taxon:286" Protein 1..266 /product="SDR family NAD(P)-dependent oxidoreductase" /EC_number="1.1.1.-" /GO_function="GO:0016491 - oxidoreductase activity [Evidence IEA]" /GO_function="GO:0070401 - NADP+ binding [Evidence IEA]" /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]" /calculated_mol_wt=29043 Region 1..255 /region_name="YqjQ" /note="Short-chain dehydrogenase [General function prediction only]; COG0300" /db_xref="CDD:440069" ORIGIN 1 mpryalitga ssgiglalae alarrgrali lvarqrdale siayelaqrf gvevlfrtcd 61 lseplqlsgl lheleqgerq idllvnnagi gtsgpfidqe wareqeliel nilalarlch 121 slgarmaaqg ggqilniasv aafqpgawms nyyaskayvl hfseglreel kergvkvsvl 181 cpgptrtaff reagmrlgrl drsklmmtpe evallalrgl dknralivpg wrnrllalsp 241 rlaprwlvrr laarinasav psaprg