Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: OprD family porin [Pseudomonas].


LOCUS       WP_003112533             416 aa            linear   BCT 01-APR-2023
ACCESSION   WP_003112533
VERSION     WP_003112533.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Pages,J.M., James,C.E. and Winterhalter,M.
  TITLE     The porin and the permeating antibiotic: a selective diffusion
            barrier in Gram-negative bacteria
  JOURNAL   Nat Rev Microbiol 6 (12), 893-903 (2008)
   PUBMED   18997824
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10507924
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..416
                     /product="OprD family porin"
                     /GO_component="GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /GO_component="GO:0046930 - pore complex [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /GO_process="GO:0006811 - monoatomic ion transport
                     [Evidence IEA]"
                     /GO_process="GO:0015802 - basic amino acid transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46389
     Region          22..414
                     /region_name="OprD"
                     /note="outer membrane porin, OprD family; pfam03573"
                     /db_xref="CDD:460978"
ORIGIN      
        1 mkilpvpmla aglallpsfa qaeffadgka glelrnfyfn rdyrqpgasq syseewaqgf
       61 llryesgyte glfglgvdal gllgvrldss persgsgllp ystsdrraah dysslgltak
      121 lrvshstlki gtlmprlpvv qfndtrlhpq tfqggllevn eidglalqfg qlrqvkqrds
      181 tnaedlgitr gnkrnvlagr hpgsdrfdfa ggtyrwserl sssyhyanle dfyrqhhlgv
      241 qhllpladdq slksdirwar stdeggsrvn nralnalfty rlgghafglg yqrmsgdsgf
      301 aylagtdpyl vnfvqigdfa nkderswqlr ydydfaaigl pgltfmsryl rgehidlldg
      361 ggrgkewerd tdiaylvqsg plknlgiklr ngtfrsdfgn didetrlivs yalplw