Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS WP_003109534 318 aa linear BCT 01-JAN-2025 ACCESSION WP_003109534 VERSION WP_003109534.1 KEYWORDS RefSeq. SOURCE Pseudomonas ORGANISM Pseudomonas Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae. REFERENCE 1 (residues 1 to 318) AUTHORS Cortes-Avalos,D., Martinez-Perez,N., Ortiz-Moncada,M.A., Juarez-Gonzalez,A., Banos-Vargas,A.A., Estrada-de Los Santos,P., Perez-Rueda,E. and Ibarra,J.A. TITLE An update of the unceasingly growing and diverse AraC/XylS family of transcriptional activators JOURNAL FEMS Microbiol Rev 45 (5) (2021) PUBMED 33837749 REFERENCE 2 (residues 1 to 318) AUTHORS Agarwal,G., Rajavel,M., Gopal,B. and Srinivasan,N. TITLE Structure-based phylogeny as a diagnostic for functional characterization of proteins with a cupin fold JOURNAL PLoS One 4 (5), e5736 (2009) PUBMED 19478949 REMARK Publication Status: Online-Only REFERENCE 3 (residues 1 to 318) AUTHORS Dunwell,J.M., Purvis,A. and Khuri,S. TITLE Cupins: the most functionally diverse protein superfamily? JOURNAL Phytochemistry 65 (1), 7-17 (2004) PUBMED 14697267 REFERENCE 4 (residues 1 to 318) AUTHORS Egan,S.M. TITLE Growing repertoire of AraC/XylS activators JOURNAL J Bacteriol 184 (20), 5529-5532 (2002) PUBMED 12270809 REFERENCE 5 (residues 1 to 318) AUTHORS Martin,R.G. and Rosner,J.L. TITLE The AraC transcriptional activators JOURNAL Curr Opin Microbiol 4 (2), 132-137 (2001) PUBMED 11282467 REFERENCE 6 (residues 1 to 318) AUTHORS Dunwell,J.M. TITLE Cupins: a new superfamily of functionally diverse proteins that include germins and plant storage proteins JOURNAL Biotechnol Genet Eng Rev 15, 1-32 (1998) PUBMED 9573603 REFERENCE 7 (residues 1 to 318) AUTHORS Gallegos,M.T., Schleif,R., Bairoch,A., Hofmann,K. and Ramos,J.L. TITLE Arac/XylS family of transcriptional regulators JOURNAL Microbiol Mol Biol Rev 61 (4), 393-410 (1997) PUBMED 9409145 COMMENT REFSEQ: This record represents a single, non-redundant, protein sequence which may be annotated on many different RefSeq genomes from the same, or different, species. ##Evidence-For-Name-Assignment-START## Evidence Category :: Conserved Domain (CDD) Evidence Accession :: Domain architecture ID 12168323 Evidence Source :: NCBI SPARCLE ##Evidence-For-Name-Assignment-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..318 /organism="Pseudomonas" /db_xref="taxon:286" Protein 1..318 /product="AraC family transcriptional regulator" /GO_function="GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]" /GO_function="GO:0043565 - sequence-specific DNA binding [Evidence IEA]" /GO_process="GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]" /calculated_mol_wt=35935 Region 25..195 /region_name="AraC_binding_2" /note="AraC-binding-like domain; pfam14525" /db_xref="CDD:434015" Region 234..316 /region_name="HTH_18" /note="Helix-turn-helix domain; pfam12833" /db_xref="CDD:432818" ORIGIN 1 mnasllsers rvferadpya vsgyvnrhvg thcirlpaag rpqasldhrt fasldlcris 61 ygaavrvtsp alesifhlqi llrghclwrg ggqehalapg elllinpddp vdltysadce 121 kfivklpcal leaicaeqrw shpargvrfl ehryrldqle gfvgllalvc reaesgerla 181 rvdshfeqil gsklltllkt nvsredpgda qvvfarlday irrhlqseie vaalaeqahm 241 strslyalfe rqlgesprqy irrlrlerir acledpgcrv rnltelaldf gfahlgrfae 301 qyrrqfgelp setlrrra