Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: GspH family T2SS minor pseudopilin variant XcpU


LOCUS       WP_003103530             172 aa            linear   BCT 20-NOV-2023
            [Pseudomonas].
ACCESSION   WP_003103530
VERSION     WP_003103530.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Korotkov,K.V. and Sandkvist,M.
  TITLE     Architecture, Function, and Substrates of the Type II Secretion
            System
  JOURNAL   EcoSal Plus 8 (2) (2019)
   PUBMED   30767847
REFERENCE   2  (residues 1 to 172)
  AUTHORS   Liu,B., Zheng,D., Jin,Q., Chen,L. and Yang,J.
  TITLE     VFDB 2019: a comparative pathogenomic platform with an interactive
            web interface
  JOURNAL   Nucleic Acids Res 47 (D1), D687-D692 (2019)
   PUBMED   30395255
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: BlastRule
            Evidence Accession :: NBR010411
            Evidence Source    :: NCBI
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     gene            1..172
                     /gene="xcpU"
                     /gene_synonym="gspH"
     Protein         1..172
                     /product="GspH family T2SS minor pseudopilin variant XcpU"
                     /calculated_mol_wt=19017
     Region          1..67
                     /region_name="FimT"
                     /note="Type IV pilus assembly protein FimT [Cell motility,
                     Extracellular structures]; COG4970"
                     /db_xref="CDD:443996"
     Region          2..149
                     /region_name="typeII_sec_gspH"
                     /note="type II secretion system protein H; TIGR01708"
                     /db_xref="CDD:130769"
ORIGIN      
        1 mrasrgftli elmvvmviis vliglavlst gfastsreld seaerlagli gvltdeavld
       61 nreyglrler dayqvlryde akarwlpvar dshrlpewae ltfeldgqpl vlagskgeke
      121 qkkgtdqpql lilssgelsp frlrlaergp egralslssd gfrlprveva rr