Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS WP_003102159 872 aa linear BCT 01-JAN-2025 [Pseudomonas]. ACCESSION WP_003102159 VERSION WP_003102159.1 KEYWORDS RefSeq. SOURCE Pseudomonas ORGANISM Pseudomonas Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae. REFERENCE 1 (residues 1 to 872) AUTHORS Huang,Y., Smith,B.S., Chen,L.X., Baxter,R.H. and Deisenhofer,J. TITLE Insights into pilus assembly and secretion from the structure and functional characterization of usher PapC JOURNAL Proc Natl Acad Sci U S A 106 (18), 7403-7407 (2009) PUBMED 19380723 REFERENCE 2 (residues 1 to 872) AUTHORS Remaut,H., Tang,C., Henderson,N.S., Pinkner,J.S., Wang,T., Hultgren,S.J., Thanassi,D.G., Waksman,G. and Li,H. TITLE Fiber formation across the bacterial outer membrane by the chaperone/usher pathway JOURNAL Cell 133 (4), 640-652 (2008) PUBMED 18485872 REFERENCE 3 (residues 1 to 872) AUTHORS Jacob-Dubuisson,F., Striker,R. and Hultgren,S.J. TITLE Chaperone-assisted self-assembly of pili independent of cellular energy JOURNAL J Biol Chem 269 (17), 12447-12455 (1994) PUBMED 7909802 REFERENCE 4 (residues 1 to 872) AUTHORS Van Rosmalen,M. and Saier,M.H. Jr. TITLE Structural and evolutionary relationships between two families of bacterial extracytoplasmic chaperone proteins which function cooperatively in fimbrial assembly JOURNAL Res Microbiol 144 (7), 507-527 (1993) PUBMED 7906046 COMMENT REFSEQ: This record represents a single, non-redundant, protein sequence which may be annotated on many different RefSeq genomes from the same, or different, species. ##Evidence-For-Name-Assignment-START## Evidence Category :: Conserved Domain (CDD) Evidence Accession :: Domain architecture ID 11459850 Evidence Source :: NCBI SPARCLE ##Evidence-For-Name-Assignment-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..872 /organism="Pseudomonas" /db_xref="taxon:286" Protein 1..872 /product="fimbria/pilus outer membrane usher protein" /GO_component="GO:0016020 - membrane [Evidence IEA]" /GO_function="GO:0015473 - fimbrial usher porin activity [Evidence IEA]" /GO_process="GO:0009297 - pilus assembly [Evidence IEA]" /calculated_mol_wt=94709 Region 7..860 /region_name="FimD" /note="Outer membrane usher protein FimD/PapC [Cell motility, Extracellular structures]; COG3188" /db_xref="CDD:442421" ORIGIN 1 mtyrherrcr tgtalmaggm alaasafgha qpgyefddrl llgsslgggd lsrfnqdgri 61 dpgryhvdvy lnerfasrse vsfranpasg avepcldedf lrqrlgakpg ddprksgdgr 121 hcaflgarlp gsrfsldvar lrldlsvpqa lldlkprgyv speewdagds mgfvnydtnl 181 yrseyrgges grsdyayvgl nsginlglwr lrhqsnytys ryngqarrkw nsirtyaqra 241 lpawrselta gesytagnll gsigyrglsl atddrmlpes lrryapqvrg taataarvvi 301 sqngrkirev nvapgpfvid dlydsayagd ldvqvfeadg svssfsvpfa svpesmrpgl 361 srysftlgqa rqygdgddlf adftyqrgms naltanlglr vaddylamlg ggvlatrfga 421 fglnstyssa rvedgarkqg wrigldysrt fqptgttltl agyrystegy relgdvlgsr 481 dalrhgdtwd sgsykqrnqf nllvsqalgg ygnlylsgss sdfydgksrd tqlqfgysnt 541 wgqlsynlaw srqtttyyqe qgdqdpgvel lrrdrrsgqr ndtltlsvsm plgsssrapt 601 lsamatrrsg dsrggslqtg lngtlgdert wsyalsanrd sevadttwng tlqkqaalat 661 vnagyaqgdr yrqysggirg alvahrdglt lgpsvgdtfa lveakgasga airggqgari 721 dgngyalaps lspyrynpis ldpvgidpda elleterkva pyagasvrvt frtltghpll 781 iqarredgsv lplgavvvdd ggaaigmvgq ggqvyaraen qrgrllvqwg tarkercelp 841 ydlagvsrdq alirlrgtcr aattdsnlen ar