Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: LysR family transcriptional regulator [Pseudomonas].


LOCUS       WP_003101343             307 aa            linear   BCT 31-DEC-2024
ACCESSION   WP_003101343
VERSION     WP_003101343.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Maddocks,S.E. and Oyston,P.C.F.
  TITLE     Structure and function of the LysR-type transcriptional regulator
            (LTTR) family proteins
  JOURNAL   Microbiology (Reading) 154 (Pt 12), 3609-3623 (2008)
   PUBMED   19047729
REFERENCE   2  (residues 1 to 307)
  AUTHORS   Schell,M.A.
  TITLE     Molecular biology of the LysR family of transcriptional regulators
  JOURNAL   Annu Rev Microbiol 47, 597-626 (1993)
   PUBMED   8257110
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10444112
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..307
                     /product="LysR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=34193
     Region          9..>153
                     /region_name="LysR_Sec_metab"
                     /note="selenium metabolism-associated LysR family
                     transcriptional regulator; NF040786"
                     /db_xref="CDD:468737"
     Region          92..295
                     /region_name="PBP2_CrgA_like_3"
                     /note="The C-terminal substrate binding domain of an
                     uncharacterized LysR-type transcriptional regulator
                     CrgA-like, contains the type 2 periplasmic binding fold;
                     cd08472"
                     /db_xref="CDD:176161"
     Site            order(102,106,145,159,161,227,244,271)
                     /site_type="active"
                     /note="putative effector binding pocket [active]"
                     /db_xref="CDD:176161"
     Site            order(103..104,108..109,111..112,115,119,121..127,190,
                     221..225,232..233,236)
                     /site_type="other"
                     /note="putative dimerization interface [polypeptide
                     binding]"
                     /db_xref="CDD:176161"
ORIGIN      
        1 mdrfdamqaf arvvdtgsft kaaetlhmsr tsvtqlvqql earlrvrlln rttrklnlta
       61 dgaayyervv rllaelddae tslssaalap rgrlridvps plarlllipa lpefharype
      121 iqidlgvsdr lvdlidenvd cvirggelrd qslmarrvgd lqlgvyaapa ylqragvpsh
      181 preledshqr ivgflwartg kalpyamrrg eeclrvagrh vlavddgnay laaglaglgi
      241 lwlphymare plargellpl fedwslepmp lylafppnrh vsgklrvfie wvaeliarha
      301 pplhppl