Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: LysM peptidoglycan-binding domain-containing protein


LOCUS       WP_003097294             341 aa            linear   BCT 01-JAN-2025
            [Pseudomonas].
ACCESSION   WP_003097294
VERSION     WP_003097294.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 341)
  AUTHORS   Visweswaran,G.R., Leenhouts,K., van Roosmalen,M., Kok,J. and
            Buist,G.
  TITLE     Exploiting the peptidoglycan-binding motif, LysM, for medical and
            industrial applications
  JOURNAL   Appl Microbiol Biotechnol 98 (10), 4331-4345 (2014)
   PUBMED   24652063
REFERENCE   2  (residues 1 to 341)
  AUTHORS   Buist,G., Steen,A., Kok,J. and Kuipers,O.P.
  TITLE     LysM, a widely distributed protein motif for binding to
            (peptido)glycans
  JOURNAL   Mol Microbiol 68 (4), 838-847 (2008)
   PUBMED   18430080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11447265
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..341
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /GO_function="GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA]"
                     /calculated_mol_wt=37455
     Region          <21..77
                     /region_name="XkdP"
                     /note="Cytoplasmic potassium-binding protein
                     Kbp/XkdP/YgaU, contains LysM domain [Inorganic ion
                     transport and metabolism]; COG1652"
                     /db_xref="CDD:441258"
ORIGIN      
        1 mrkslvalll laasglaqaq vdlreghpdr ytvvrgdtlw disgkflrqp wkwpelwhan
       61 pqiqnphliy pgdtlslvyv dgqprlvlnr gesrgtikls pkirstpiae aiptipldki
      121 nsfllanriv ddektftsap yivagnaeri vsgtgdriya rgkfadgqpa ygifrqgkvy
      181 idpktkevlg inaddiggge vvategdvat laltrttqev rlgdrlfpte eravnstfmp
      241 gepsrevkge iidvprgvtq igqfdvvtln rgqrdglaeg nvlaiykvge tvrdrvtges
      301 vkipderagl lmvfrtykkl syalvlmasr plsvtdrvqn p