Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS WP_003096769 366 aa linear BCT 20-NOV-2023 [Pseudomonas]. ACCESSION WP_003096769 VERSION WP_003096769.1 KEYWORDS RefSeq. SOURCE Pseudomonas ORGANISM Pseudomonas Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae. REFERENCE 1 (residues 1 to 366) AUTHORS Wargo,M.J. TITLE Choline catabolism to glycine betaine contributes to Pseudomonas aeruginosa survival during murine lung infection JOURNAL PLoS ONE 8 (2), e56850 (2013) PUBMED 23457628 REFERENCE 2 (residues 1 to 366) AUTHORS Wargo,M.J., Szwergold,B.S. and Hogan,D.A. TITLE Identification of two gene clusters and a transcriptional regulator required for Pseudomonas aeruginosa glycine betaine catabolism JOURNAL J. Bacteriol. 190 (8), 2690-2699 (2008) PUBMED 17951379 COMMENT REFSEQ: This record represents a single, non-redundant, protein sequence which may be annotated on many different RefSeq genomes from the same, or different, species. ##Evidence-For-Name-Assignment-START## Evidence Category :: BlastRule Evidence Accession :: NBR005966 Evidence Source :: NCBI ##Evidence-For-Name-Assignment-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..366 /organism="Pseudomonas" /db_xref="taxon:286" gene 1..366 /gene="gbcB" Protein 1..366 /product="glycine-betaine demethylase subunit GbcB" /calculated_mol_wt=40404 Region 21..252 /region_name="FNR_iron_sulfur_binding_1" /note="Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron...; cd06215" /db_xref="CDD:99811" Site order(53,67..70,84..86,88,92..94,133,136,250,252) /site_type="other" /note="FAD binding pocket [chemical binding]" /db_xref="CDD:99811" Site order(67,69..70) /site_type="other" /note="FAD binding motif [chemical binding]" /db_xref="CDD:99811" Site order(91,94,97,104,112,114) /site_type="other" /note="phosphate binding motif [ion binding]" /db_xref="CDD:99811" Site order(128,132..135,137) /site_type="other" /note="beta-alpha-beta structure motif" /db_xref="CDD:99811" Site order(133..134,159..161,225..226) /site_type="other" /note="NAD binding pocket [chemical binding]" /db_xref="CDD:99811" Region 283..366 /region_name="Fdx" /note="Ferredoxin [Energy production and conversion]; COG0633" /db_xref="CDD:440398" ORIGIN 1 mssnflnpvt tqtwangrhl vrcvkviqet wdvrtfcfma dqpilfffkp gqfvtlelei 61 dgepvmrsyt issspsvpys fsitikrvpg grvsnwlhdn lkegqelpvh gpvglfnaid 121 fpadkvlfls ggvgitpvms marwffdtna nvdmvfvhsa rspkdiiyhr elehmasrid 181 nfslhiicer hglgeawagy rgylnlrmle liapdflere ifccgptpym savkhllqgh 241 gydmsryhee afgptppevr advrelaaea aeapevpvad qhqveftatg ksirvspget 301 vhaaaaklgl hipkacgmgi cgtckvmkta gevemehngg itdedvaegy ilsccsvpkg 361 dvvidy