Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: oligoribonuclease [Gammaproteobacteria].

FASTAView on NCBI
LOCUS       WP_003095671             180 aa            linear   BCT 07-NOV-2024
ACCESSION   WP_003095671
VERSION     WP_003095671.1
KEYWORDS    RefSeq.
SOURCE      Gammaproteobacteria
  ORGANISM  Gammaproteobacteria
            Bacteria; Pseudomonadati; Pseudomonadota.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF003765.0
            Evidence Source    :: NCBI Protein Cluster (PRK)
            Source Identifier  :: PRK05359
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Gammaproteobacteria"
                     /db_xref="taxon:1236"
     gene            1..180
                     /gene="orn"
     Protein         1..180
                     /product="oligoribonuclease"
                     /EC_number="3.1.-.-"
                     /GO_function="GO:0000175 - 3'-5'-exoribonuclease activity
                     [Evidence IEA]"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /calculated_mol_wt=20696
     Region          3..180
                     /region_name="PRK05359"
                     /note="oligoribonuclease; Provisional"
                     /db_xref="CDD:235429"
     Site            order(11..14,16,106..107,109..111,157,162)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:99838"
     Site            order(11..14,16,106..107,109..110,157,162)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:99838"
     Site            order(11,13,111,157,162)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99838"
     Site            order(34,109..110,113,116,129..130,132,135,138,143..144,
                     175,177..178)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:99838"
ORIGIN      
        1 mqnpqnliwi dlemtgldpd rdviiemati vtdsdlntla egpviaihqp eeilagmdew
       61 ntrqhgqsgl tqrvrestvs maeaeaqtla fleqwvpkrs spicgnsicq drrflyrhmp
      121 rlegyfhyrn ldvstlkela arwapqvres fkkgnthlal ddiresiael rhyrdhfikl