Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: LysR substrate-binding domain-containing protein


LOCUS       WP_003092195             295 aa            linear   BCT 01-MAR-2025
            [Pseudomonas].
ACCESSION   WP_003092195
VERSION     WP_003092195.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..295
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=32708
     Region          3..62
                     /region_name="HTH_1"
                     /note="Bacterial regulatory helix-turn-helix protein, lysR
                     family; pfam00126"
                     /db_xref="CDD:459683"
     Region          92..288
                     /region_name="PBP2_LTTR_aromatics_like_2"
                     /note="The C-terminal substrate binding domain of an
                     uncharacterized LysR-type transcriptional regulator
                     similar to regulators involved in the catabolism of
                     aromatic compounds, contains type 2 periplasmic binding
                     fold; cd08448"
                     /db_xref="CDD:176139"
     Site            order(97,104,107..108,110..111,114,122,124,126,170,
                     204..205,224..225,231..232,234..235,253)
                     /site_type="other"
                     /note="putative dimerization interface [polypeptide
                     binding]"
                     /db_xref="CDD:176139"
     Site            order(98,147,194..195,202)
                     /site_type="other"
                     /note="putative substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:176139"
ORIGIN      
        1 mdlrqlryfi avaeelhfgr aaarlfisqp alsfdikkle eqlgtqlllr nnksvkltga
       61 gqvllvearn lllqaekvkr ltqlsaegdv gqlrvgfvns mlyrglpram srferehpnm
      121 evvlgemnsa eqaqalqrgq idlgfvhwgr lpaeivsepl isdpflcclp aghrlagqar
      181 ldlaelrded filfprhvsp hyhdliiarc vdagfsprir hearlwqtva amvglgmgva
      241 lipetlclaw rnevryleie pagarseiha ilpasepsra aqaflatlks gldda