Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: LysR substrate-binding domain-containing protein


LOCUS       WP_003084019             309 aa            linear   BCT 26-FEB-2025
            [Pseudomonas].
ACCESSION   WP_003084019
VERSION     WP_003084019.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..309
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=34487
     Region          9..63
                     /region_name="HTH_1"
                     /note="Bacterial regulatory helix-turn-helix protein, lysR
                     family; pfam00126"
                     /db_xref="CDD:459683"
     Region          98..296
                     /region_name="PBP2_MdcR"
                     /note="The C-terminal substrate-binding domian of
                     LysR-type transcriptional regulator MdcR, which involved
                     in the malonate catabolism contains the type 2 periplasmic
                     binding fold; cd08416"
                     /db_xref="CDD:176108"
     Site            order(113..114,116..117,120,124,126..132,226..231,
                     237..238,240..241)
                     /site_type="other"
                     /note="putative dimerization interface [polypeptide
                     binding]"
                     /db_xref="CDD:176108"
ORIGIN      
        1 mlideeitlk kletflafmr tgnlaraaae lgtsnvsvhr aihslesalr cplfkhegrn
       61 ltplesayvl eeraqklvqe vldtvrltre aagfsaerfk lgalysltvk tvpqlimglk
      121 lrrsalnidl ilgsnvdlfy qlknmeldai lvslndsvsd pdcehlplfs ddiflavpvd
      181 spyarlaeid lstlrdtpfv tltqgfathq dgtrvfqqag fepqiamqvn diftllsmvs
      241 sgvghallpk rieavyenrv rliplqpryr lqqhigvvfl kakerdpnll allaecrmys
      301 lrleqeaag