Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: LysR family transcriptional regulator [Pseudomonas].


LOCUS       WP_003082510             297 aa            linear   BCT 20-NOV-2023
ACCESSION   WP_003082510
VERSION     WP_003082510.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10444100
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..297
                     /product="LysR family transcriptional regulator"
                     /calculated_mol_wt=33132
     Region          21..68
                     /region_name="HTH_1"
                     /note="Bacterial regulatory helix-turn-helix protein, lysR
                     family; pfam00126"
                     /db_xref="CDD:459683"
     Region          99..296
                     /region_name="PBP2_DntR_like_3"
                     /note="The C-terminal substrate binding domain of an
                     uncharacterized LysR-type transcriptional regulator
                     similar to DntR, which is involved in the catabolism of
                     dinitrotoluene; contains the type 2 periplasmic binding
                     fold; cd08461"
                     /db_xref="CDD:176150"
     Site            order(105,107..108,112,170,208,272)
                     /site_type="other"
                     /note="putative substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:176150"
     Site            order(106,109..110,113..114,117..118,120..121,124..125,
                     127..131,133,196,225..229,232..233,236..237,240,254)
                     /site_type="other"
                     /note="putative dimerization interface [polypeptide
                     binding]"
                     /db_xref="CDD:176150"
ORIGIN      
        1 minlrrldln llvtldvllt ehnvtraaer lnfsqpsvsv hlaklraifd dplllpgprg
       61 mrptaraeel replrlalea leqavapaap fdptqsrhtw rvaatdyaes aillpilasl
      121 rrqapgsrla vlelaptriv rqaergeidl afhtleeapp glrcrrlfse ryvlagragh
      181 pglrrrptlk qfcrleqaiv spdgggflgp tdqalaelga errvalsvph flflravles
      241 tdlvallpsr lvrerdrlrv veaplevsgy dlamlwhers hrdpahrwlr eliaasv