Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS WP_002920130 240 aa linear BCT 18-FEB-2025 [Gammaproteobacteria]. ACCESSION WP_002920130 VERSION WP_002920130.1 KEYWORDS RefSeq. SOURCE Gammaproteobacteria ORGANISM Gammaproteobacteria Bacteria; Pseudomonadati; Pseudomonadota. REFERENCE 1 (residues 1 to 240) AUTHORS Stuffle,E.C., Johnson,M.S. and Watts,K.J. TITLE PAS domains in bacterial signal transduction JOURNAL Curr Opin Microbiol 61, 8-15 (2021) PUBMED 33647528 REFERENCE 2 (residues 1 to 240) AUTHORS Henry,J.T. and Crosson,S. TITLE Ligand-binding PAS domains in a genomic, cellular, and structural context JOURNAL Annu Rev Microbiol 65, 261-286 (2011) PUBMED 21663441 REFERENCE 3 (residues 1 to 240) AUTHORS Aravind,L., Anantharaman,V., Balaji,S., Babu,M.M. and Iyer,L.M. TITLE The many faces of the helix-turn-helix domain: transcription regulation and beyond JOURNAL FEMS Microbiol Rev 29 (2), 231-262 (2005) PUBMED 15808743 REFERENCE 4 (residues 1 to 240) AUTHORS Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J. TITLE The PAS fold. A redefinition of the PAS domain based upon structural prediction JOURNAL Eur J Biochem 271 (6), 1198-1208 (2004) PUBMED 15009198 REFERENCE 5 (residues 1 to 240) AUTHORS Rosinski,J.A. and Atchley,W.R. TITLE Molecular evolution of helix-turn-helix proteins JOURNAL J Mol Evol 49 (3), 301-309 (1999) PUBMED 10473770 REFERENCE 6 (residues 1 to 240) AUTHORS Taylor,B.L. and Zhulin,I.B. TITLE PAS domains: internal sensors of oxygen, redox potential, and light JOURNAL Microbiol Mol Biol Rev 63 (2), 479-506 (1999) PUBMED 10357859 REFERENCE 7 (residues 1 to 240) AUTHORS Ponting,C.P. and Aravind,L. TITLE PAS: a multifunctional domain family comes to light JOURNAL Curr Biol 7 (11), R674-R677 (1997) PUBMED 9382818 REFERENCE 8 (residues 1 to 240) AUTHORS Wintjens,R. and Rooman,M. TITLE Structural classification of HTH DNA-binding domains and protein-DNA interaction modes JOURNAL J Mol Biol 262 (2), 294-313 (1996) PUBMED 8831795 REFERENCE 9 (residues 1 to 240) AUTHORS Brennan,R.G. and Matthews,B.W. TITLE The helix-turn-helix DNA binding motif JOURNAL J Biol Chem 264 (4), 1903-1906 (1989) PUBMED 2644244 COMMENT REFSEQ: This record represents a single, non-redundant, protein sequence which may be annotated on many different RefSeq genomes from the same, or different, species. ##Evidence-For-Name-Assignment-START## Evidence Category :: Conserved Domain (CDD) Evidence Accession :: Domain architecture ID 11459460 Evidence Source :: NCBI SPARCLE ##Evidence-For-Name-Assignment-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..240 /organism="Gammaproteobacteria" /db_xref="taxon:1236" Protein 1..240 /product="helix-turn-helix transcriptional regulator" /GO_function="GO:0003677 - DNA binding [Evidence IEA]" /GO_function="GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]" /GO_function="GO:0005515 - protein binding [Evidence IEA]" /GO_function="GO:0140110 - transcription regulator activity [Evidence IEA]" /GO_process="GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]" /GO_process="GO:0007165 - signal transduction [Evidence IEA]" /calculated_mol_wt=26680 Region 23..232 /region_name="YheO" /note="Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains [Transcription]; COG2964" /db_xref="CDD:442204" ORIGIN 1 msrslltnet seldlldqrp fdqtdfdilk syeavvdgla mligshceiv lhslqdlkcs 61 airiangeht grqigspitd lalrmlhdmt gadssvskcy ftraksgvlm ksvtiairnr 121 dhrvigllci nmnldvpfsq imstfippet pevnspvnfa ssvddlvaqt leftieevna 181 drsvsnnakn rqivlnlyek gifdikdain qvadrlnisk htvylyirqf ksgdfqgldk