Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: LysR family transcriptional regulator


LOCUS       WP_002902971             315 aa            linear   BCT 31-DEC-2024
            [Gammaproteobacteria].
ACCESSION   WP_002902971
VERSION     WP_002902971.1
KEYWORDS    RefSeq.
SOURCE      Gammaproteobacteria
  ORGANISM  Gammaproteobacteria
            Bacteria; Pseudomonadati; Pseudomonadota.
REFERENCE   1  (residues 1 to 315)
  AUTHORS   Maddocks,S.E. and Oyston,P.C.F.
  TITLE     Structure and function of the LysR-type transcriptional regulator
            (LTTR) family proteins
  JOURNAL   Microbiology (Reading) 154 (Pt 12), 3609-3623 (2008)
   PUBMED   19047729
REFERENCE   2  (residues 1 to 315)
  AUTHORS   Schell,M.A.
  TITLE     Molecular biology of the LysR family of transcriptional regulators
  JOURNAL   Annu Rev Microbiol 47, 597-626 (1993)
   PUBMED   8257110
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10444297
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gammaproteobacteria"
                     /db_xref="taxon:1236"
     Protein         1..315
                     /product="LysR family transcriptional regulator"
                     /GO_function="GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /calculated_mol_wt=34976
     Region          7..66
                     /region_name="HTH_1"
                     /note="Bacterial regulatory helix-turn-helix protein, lysR
                     family; pfam00126"
                     /db_xref="CDD:459683"
     Region          93..291
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(111..112,114..115,118,122,124..130,223..228,
                     234..235,237..238)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176163"
ORIGIN      
        1 mktlpdlqqi eililivkhg sfrqaakaln lsppaltvai nhleeklgvr llnrstrsls
       61 ltavgeefln nitpvvndyr rvvdslnyhr ltpegvvkvn lprividlff qdyfiafkna
      121 cpnvtlelya tdrkvniies gfdagirysq dvpkemiaip fgeklslipv aspdyireag
      181 epdtpqslvn frcinrcfpg gekyrwefig psgelsevav kgdlvvdads amiqaaesgl
      241 giafvyqslv tqqlsagslv hllpdyrypa dhfcvyypsr khipaplraf iawvmaqnkn
      301 ilgqqtarhg srpeg