Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF


LOCUS       WP_001542138             479 aa            linear   BCT 25-APR-2022
            [Salmonella].
ACCESSION   WP_001542138
VERSION     WP_001542138.1
KEYWORDS    RefSeq.
SOURCE      Salmonella
  ORGANISM  Salmonella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 479)
  AUTHORS   Andersen,N.M. and Douthwaite,S.
  TITLE     YebU is a m5C methyltransferase specific for 16 S rRNA nucleotide
            1407
  JOURNAL   J Mol Biol 359 (3), 777-786 (2006)
   PUBMED   16678201
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF008898.0
            Evidence Source    :: NCBI Protein Cluster (PRK)
            Source Identifier  :: PRK11933
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Salmonella"
                     /db_xref="taxon:590"
     gene            1..479
                     /gene="rsmF"
     Protein         1..479
                     /product="16S rRNA (cytosine(1407)-C(5))-methyltransferase
                     RsmF"
                     /EC_number="2.1.1.178"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0001510 - RNA methylation [Evidence IEA]"
                     /calculated_mol_wt=53160
     Region          6..474
                     /region_name="yebU"
                     /note="rRNA (cytosine-C(5)-)-methyltransferase RsmF;
                     Reviewed; PRK11933"
                     /db_xref="CDD:183387"
ORIGIN      
        1 maqhavyfpd afltqmream pstlsfdefi sacqrplrrs irintlkisv adflaliapy
       61 gwsltpipwc hegfwierdd eealplgsta ehlsglfyiq eassmlpvaa lfaddnhpqr
      121 vmdmaaapgs kttqiaarmg nrgailanef sasrvkvlha nisrcgiant althfdgrvf
      181 gaalpemfda illdapcsge gvvrkdpdal knwspesnld iaatqrelld safhalrpgg
      241 tlvystctln rqeneavclw lketyadave flplgdlfpd adraltpegf lhvfpqiydc
      301 egffvarlrk msslpampap gykvgafpft plkgrealhv tqaanavgll wdenlhlwqr
      361 ekevwlfpae iesligkvrf srlgiklaes hnkgyrwqhe atialacpth ahafelsvqe
      421 aeewyrgrdi ypqtppaadd vlvtfqhqpl glakrigari knsyprelvr dgklftgns