MULTISPECIES: SsrA-binding protein SmpB [Salmonella].

LOCUS       WP_001518569             160 aa            linear   BCT 25-APR-2022
ACCESSION   WP_001518569
VERSION     WP_001518569.1
KEYWORDS    RefSeq.
SOURCE      Salmonella
  ORGANISM  Salmonella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Hong,S.J., Tran,Q.A. and Keiler,K.C.
  TITLE     Cell cycle-regulated degradation of tmRNA is controlled by RNase R
            and SmpB
  JOURNAL   Mol Microbiol 57 (2), 565-575 (2005)
   PUBMED   15978085
REFERENCE   2  (residues 1 to 160)
  AUTHORS   Ivanova,N., Pavlov,M.Y., Bouakaz,E., Ehrenberg,M. and
            Schiavone,L.H.
  TITLE     Mapping the interaction of SmpB with ribosomes by footprinting of
            ribosomal RNA
  JOURNAL   Nucleic Acids Res 33 (11), 3529-3539 (2005)
   PUBMED   15972795
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 160)
  AUTHORS   Burks,J., Zwieb,C., Muller,F., Wower,I. and Wower,J.
  TITLE     Comparative 3-D modeling of tmRNA
  JOURNAL   BMC Mol Biol 6, 14 (2005)
   PUBMED   15958166
  REMARK    Publication Status: Online-Only
REFERENCE   4  (residues 1 to 160)
  AUTHORS   Metzinger,L., Hallier,M. and Felden,B.
  TITLE     Independent binding sites of small protein B onto
            transfer-messenger RNA during trans-translation
  JOURNAL   Nucleic Acids Res 33 (8), 2384-2394 (2005)
   PUBMED   15860775
  REMARK    Publication Status: Online-Only
REFERENCE   5  (residues 1 to 160)
  AUTHORS   Sundermeier,T.R., Dulebohn,D.P., Cho,H.J. and Karzai,A.W.
  TITLE     A previously uncharacterized role for small protein B (SmpB) in
            transfer messenger RNA-mediated trans-translation
  JOURNAL   Proc Natl Acad Sci U S A 102 (7), 2316-2321 (2005)
   PUBMED   15699355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF003843.0
            Evidence Source    :: NCBI Protein Cluster (PRK)
            Source Identifier  :: PRK05422
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Salmonella"
                     /db_xref="taxon:590"
     gene            1..160
                     /gene="smpB"
     Protein         1..160
                     /product="SsrA-binding protein SmpB"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /calculated_mol_wt=18101
     Region          9..157
                     /region_name="smpB"
                     /note="SsrA-binding protein SmpB; PRK05422"
                     /db_xref="CDD:235455"
     Site            order(31..36,38..39,41..42,45,62,91..96,124)
                     /site_type="other"
                     /note="SmpB-tmRNA interface"
                     /db_xref="CDD:187755"
ORIGIN      
        1 mtkkkahkpg satialnkra rheyfieeef eaglalqgwe vkslragkan igdsyvilkd
       61 geawlfganf tpmavasthv vcdptrtrkl llnqreldsl ygrinregyt vvalslywkn
      121 awckvkigva kgkkqhdkrs dlkerewqld karimknagr