[50S ribosomal protein L16]-arginine 3-hydroxylase [Escherichia

FASTA View on NCBI
LOCUS       WP_001301987             373 aa            linear   BCT 10-FEB-2020
            coli].
ACCESSION   WP_001301987
VERSION     WP_001301987.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 373)
  AUTHORS   van Staalduinen,L.M., Novakowski,S.K. and Jia,Z.
  TITLE     Structure and functional analysis of YcfD, a novel
            2-oxoglutarate/Fe(2)(+)-dependent oxygenase involved in
            translational regulation in Escherichia coli
  JOURNAL   J. Mol. Biol. 426 (9), 1898-1910 (2014)
   PUBMED   24530688
REFERENCE   2  (residues 1 to 373)
  AUTHORS   Ge,W., Wolf,A., Feng,T., Ho,C.H., Sekirnik,R., Zayer,A.,
            Granatino,N., Cockman,M.E., Loenarz,C., Loik,N.D., Hardy,A.P.,
            Claridge,T.D.W., Hamed,R.B., Chowdhury,R., Gong,L., Robinson,C.V.,
            Trudgian,D.C., Jiang,M., Mackeen,M.M., Mccullagh,J.S.,
            Gordiyenko,Y., Thalhammer,A., Yamamoto,A., Yang,M., Liu-Yi,P.,
            Zhang,Z., Schmidt-Zachmann,M., Kessler,B.M., Ratcliffe,P.J.,
            Preston,G.M., Coleman,M.L. and Schofield,C.J.
  TITLE     Oxygenase-catalyzed ribosome hydroxylation occurs in prokaryotes
            and humans
  JOURNAL   Nat. Chem. Biol. 8 (12), 960-962 (2012)
   PUBMED   23103944
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: BlastRule
            Evidence Accession :: NBR011093
            Evidence Source    :: NCBI
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     gene            1..373
                     /gene="roxA"
                     /gene_synonym="ycfD"
     Protein         1..373
                     /product="[50S ribosomal protein L16]-arginine
                     3-hydroxylase"
                     /EC_number="1.14.11.47"
                     /calculated_mol_wt=42464
     Region          7..276
                     /region_name="RoxA"
                     /note="Ribosomal protein L16 Arg81 hydroxylase, contains
                     JmjC domain [Translation, ribosomal structure and
                     biogenesis]; COG2850"
                     /db_xref="CDD:442098"
     Region          256..370
                     /region_name="ROXA-like_wH"
                     /note="ROXA-like winged helix; pfam20514"
                     /db_xref="CDD:466663"
ORIGIN      
        1 meyqltlnwp dflerhwqkr pvvlkrgfnn fidpispdel aglamesevd srlvshqdgk
       61 wqvshgpfes ydhlgetnws llvqavnhwh eptaalmrpf relpdwridd lmisfsvpgg
      121 gvgphldqyd vfiiqgtgrr rwrvgeklqm kqhcphpdll qvdpfeaiid eelepgdily
      181 ippgfphegy alenamnysv gfrapntrel isgfadyvlq relggnyysd pdvpprahpa
      241 dvlpqemdkl remmlelinq pehfkqwfge fisqsrheld iappeppyqp deiydalkqg
      301 dvlvrlgglr vlrigddvyt ngekidsphr paldalasni altaenfgda ledpsflaml
      361 aalvnsgywf feg