Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: formaldehyde-responsive transcriptional repressor


LOCUS       WP_001141271              91 aa            linear   BCT 28-MAY-2024
            FrmR [Pseudomonadota].
ACCESSION   WP_001141271
VERSION     WP_001141271.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonadota
  ORGANISM  Pseudomonadota
            Bacteria; Pseudomonadati.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Osman,D., Piergentili,C., Chen,J., Sayer,L.N., Uson,I.,
            Huggins,T.G., Robinson,N.J. and Pohl,E.
  TITLE     The Effectors and Sensory Sites of Formaldehyde-responsive
            Regulator FrmR and Metal-sensing Variant
  JOURNAL   J. Biol. Chem. 291 (37), 19502-19516 (2016)
   PUBMED   27474740
REFERENCE   2  (residues 1 to 91)
  AUTHORS   Chen,N.H., Djoko,K.Y., Veyrier,F.J. and McEwan,A.G.
  TITLE     Formaldehyde Stress Responses in Bacterial Pathogens
  JOURNAL   Front Microbiol 7, 257 (2016)
   PUBMED   26973631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF008464.0
            Evidence Source    :: NCBI Protein Cluster (PRK)
            Source Identifier  :: PRK11352
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Pseudomonadota"
                     /db_xref="taxon:1224"
     gene            1..91
                     /gene="frmR"
     Protein         1..91
                     /product="formaldehyde-responsive transcriptional
                     repressor FrmR"
                     /calculated_mol_wt=10187
     Region          1..91
                     /region_name="PRK11352"
                     /note="formaldehyde-responsive transcriptional repressor
                     FrmR"
                     /db_xref="CDD:183095"
     Site            order(3,35,60,64)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197388"
     Site            order(8,11..12,15..16,19,22..23,25..26,29..32,34..36,
                     38..40,42..43,45..46,49..50,53..54,56..58,60..62,65,
                     75..76,78..87)
                     /site_type="other"
                     /note="putative homotetramer interface [polypeptide
                     binding]"
                     /db_xref="CDD:197388"
     Site            order(8,11..12,15..16,19,22..23,25..26,29..32,34..36,
                     38..40,42..43,45..46,49..50,53,56,60,81,84..87)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:197388"
     Site            order(54,57..58,61..62,64..65,75..76,78..80,82..83)
                     /site_type="other"
                     /note="putative homodimer-homodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:197388"
     Site            order(60,81)
                     /site_type="other"
                     /note="putative allosteric switch controlling residues"
                     /db_xref="CDD:197388"
ORIGIN      
        1 mpstpeekkk vltrvrrirg qidalersle gdaecrailq qiaavrgaan glmaevlesh
       61 iretfdrndc ysrevsqsvd dtielvrayl k