Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

long polar fimbrial usher protein LpfC-O113 [Shigella flexneri].


LOCUS       WP_000989228             840 aa            linear   BCT 15-OCT-2023
ACCESSION   WP_000989228
VERSION     WP_000989228.1
KEYWORDS    RefSeq.
SOURCE      Shigella flexneri
  ORGANISM  Shigella flexneri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1  (residues 1 to 840)
  AUTHORS   Doughty,S., Sloan,J., Bennett-Wood,V., Robertson,M.,
            Robins-Browne,R.M. and Hartland,E.L.
  TITLE     Identification of a novel fimbrial gene cluster related to long
            polar fimbriae in locus of enterocyte effacement-negative strains
            of enterohemorrhagic Escherichia coli
  JOURNAL   Infect Immun 70 (12), 6761-6769 (2002)
   PUBMED   12438351
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: BlastRule
            Evidence Accession :: NBR016325
            Evidence Source    :: NCBI
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Shigella flexneri"
                     /db_xref="taxon:623"
     gene            1..840
                     /gene="lpfC-O113"
                     /GO_function="GO:0015473 - fimbrial usher porin activity
                     [Evidence IEA]"
                     /GO_process="GO:0009297 - pilus assembly [Evidence IEA]"
     Protein         1..840
                     /product="long polar fimbrial usher protein LpfC-O113"
                     /calculated_mol_wt=92692
     Region          3..840
                     /region_name="FimD"
                     /note="Outer membrane usher protein FimD/PapC [Cell
                     motility, Extracellular structures]; COG3188"
                     /db_xref="CDD:442421"
ORIGIN      
        1 mmttrivvgl tagtclifsq nlmaevsvfn palleinhqs gvdirqfnra nlmppgvysv
       61 difingkmfe rqdvtfvqdn pdadlhacfi aikktlssfg ikvdalksfn dvdetvcldp
      121 apriegsswq fdsdklqlni sihqiymdam aydyisptrw deginaltin ydfsgshtlr
      181 sdygsqetdt sylnlrngln igpwrlrnys tlntsdgrae ynsistwiqr diaalrsqim
      241 igdtwtasdi fdstqirgar lytdndmlpa sqngfapvvr giaksnatvi irqngyviyq
      301 savpqgafei tdlntastgg dldvtikeed gseqrftqpy aslailkreg ltdvdvsvge
      361 lrdedgftpd vlqaqilhgf shgitlyggm qaaenygsaa lgvgkdlgal gaisfdvtha
      421 ranfshddte tgqsyrflys klfddtdtsl rlvgyryste gyytlnewas rrnspedfwe
      481 tgnrrsrveg tltqslgrdy gnlyltlsrq qywhtddver lmqfgysssw krlswnvsws
      541 ysntarqgtg nnhasdntse qiymlslsvp lsgwwgnsya tysvsqndns gsshqlglsg
      601 talernnlsw nlmqsynshd devggnmslt ydgsygtvng synysqnsqr lnygirggil
      661 ahsegvtlsq elgetialvk apgaagleid nmrgaatdwr gytvktqlnp ydenrvaisd
      721 nyfsksniel dntvvtmvpt rgavvkaefv thvgyrvlfr vlnangkpvp fgaiaaiqda
      781 sladsgivgd rgelylsglp ekgqvtlswg enastkcifn ysfstpeses glieqgvtch