Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: type III secretion system LEE translocon pore-forming


LOCUS       WP_000935759             374 aa            linear   BCT 15-JAN-2020
            subunit EspD [Enterobacteriaceae].
ACCESSION   WP_000935759
VERSION     WP_000935759.1
KEYWORDS    RefSeq.
SOURCE      Enterobacteriaceae
  ORGANISM  Enterobacteriaceae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales.
REFERENCE   1  (residues 1 to 374)
  AUTHORS   Chatterjee,A., Caballero-Franco,C., Bakker,D., Totten,S. and
            Jardim,A.
  TITLE     Pore-forming Activity of the Escherichia coli Type III Secretion
            System Protein EspD
  JOURNAL   J. Biol. Chem. 290 (42), 25579-25594 (2015)
   PUBMED   26324713
REFERENCE   2  (residues 1 to 374)
  AUTHORS   Elliott,S.J., Wainwright,L.A., McDaniel,T.K., Jarvis,K.G.,
            Deng,Y.K., Lai,L.C., McNamara,B.P., Donnenberg,M.S. and Kaper,J.B.
  TITLE     The complete sequence of the locus of enterocyte effacement (LEE)
            from enteropathogenic Escherichia coli E2348/69
  JOURNAL   Mol. Microbiol. 28 (1), 1-4 (1998)
   PUBMED   9593291
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: BlastRule
            Evidence Accession :: NBR000182
            Evidence Source    :: NCBI
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Enterobacteriaceae"
                     /db_xref="taxon:543"
     gene            1..374
                     /gene="espD"
     Protein         1..374
                     /product="type III secretion system LEE translocon
                     pore-forming subunit EspD"
                     /calculated_mol_wt=38952
     Region          36..361
                     /region_name="SseC"
                     /note="Type III secretion system effector SseC (host
                     membrane pore formation) [Intracellular trafficking,
                     secretion, and vesicular transport]; COG5613"
                     /db_xref="CDD:444344"
ORIGIN      
        1 mlnvnndtls vtsgvntasg tsgitqsetg lsldlqlvks mnssagwtes splptppagh
       61 slvtpsaaed vlsklfggis gevtsrteea epqrtsypyl sqvntvdpqq mmmmvtllsl
      121 dtsaqkvssl knsneiymdg qtkalenktq eykkqleeqq kaeeksqksk ivgqvfgwlg
      181 valtavaavf npalwavvai gatamalqta vdvmgenapq glktaaqvfg gismaasilt
      241 agvggvssll skfgnvanki gssvvkvvek aaealvknvf akistvaegv tngirsagtt
      301 alnneaaqlq mlsqlaafav qnltrqsesl gesakleldk aaselqnqas ylqsvsqlms
      361 dsarvnsriv sgri