Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS WP_000824309 377 aa linear BCT 20-JUN-2019 ACCESSION WP_000824309 VERSION WP_000824309.1 KEYWORDS RefSeq. SOURCE Salmonella ORGANISM Salmonella Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae. COMMENT REFSEQ: This record represents a single, non-redundant, protein sequence which may be annotated on many different RefSeq genomes from the same, or different, species. ##Evidence-For-Name-Assignment-START## Evidence Category :: HMM Evidence Accession :: NF007841.0 Evidence Source :: NCBI Protein Cluster (PRK) Source Identifier :: PRK10554 ##Evidence-For-Name-Assignment-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..377 /organism="Salmonella" /db_xref="taxon:590" gene 1..377 /gene="ompC" Protein 1..377 /product="porin OmpC" /GO_function="GO:0015288 - porin activity [Evidence IEA]" /GO_process="GO:0034220 - ion transmembrane transport [Evidence IEA]" /calculated_mol_wt=41476 Region 23..377 /region_name="OM_channels" /note="Porin superfamily. These outer membrane channels share a beta-barrel structure that differ in strand and shear number. Classical (gram-negative) porins are non-specific channels for small hydrophillic molecules and form 16 beta-stranded barrels (16,20)...; cl21487" /db_xref="CDD:473880" Site order(30,32,38,40..42,63..67,73,75..77,79,81..84,95..96, 98..102,112..114,147,149..150,336..337,340,373,375,377) /site_type="other" /note="trimer interface [polypeptide binding]" /db_xref="CDD:238208" Site order(37,58,96,127,147) /site_type="active" /note="eyelet of channel [active]" /db_xref="CDD:238208" ORIGIN 1 mkrkvlalvi pallaagaah aaeiynkdgn kldlygkvdg lhyfsddssk dgdqtymrvg 61 fkgetqindq ltgygqweyn vqanttegeg answtrlafa glkfgdygsf dygrnygvly 121 dvegwtdmlp efggdsytya dnfmtgrang vatyrntdff glvdglnfal qyqganenqv 181 sheqegtnng gdrnvknang dgfgisstyd lgmgvsfgaa yttsdrtngq vnystaggdk 241 adawtvgaky danniylatm ysetrnmtpy gnddcrscva nktqnfevta qyqfdfglrp 301 avsflmskgk dltynnvngd dkdlvkyadv gatyyfnknf styvdykinl lddddqfykd 361 agistddiva lgmvyqf