Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: 50S ribosomal protein L25 [Enterobacteriaceae].


LOCUS       WP_000494183              94 aa            linear   BCT 11-MAY-2022
ACCESSION   WP_000494183
VERSION     WP_000494183.1
KEYWORDS    RefSeq.
SOURCE      Enterobacteriaceae
  ORGANISM  Enterobacteriaceae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Gongadze,G.M., Korepanov,A.P., Stolboushkina,E.A., Zelinskaya,N.V.,
            Korobeinikova,A.V., Ruzanov,M.V., Eliseev,B.D., Nikonov,O.S.,
            Nikonov,S.V., Garber,M.B. and Lim,V.I.
  TITLE     The crucial role of conserved intermolecular H-bonds inaccessible
            to the solvent in formation and stabilization of the TL5.5 SrRNA
            complex
  JOURNAL   J. Biol. Chem. 280 (16), 16151-16156 (2005)
   PUBMED   15718233
REFERENCE   2  (residues 1 to 94)
  AUTHORS   Fedorov,R., Meshcheryakov,V., Gongadze,G., Fomenkova,N.,
            Nevskaya,N., Selmer,M., Laurberg,M., Kristensen,O.,
            Al-Karadaghi,S., Liljas,A., Garber,M. and Nikonov,S.
  TITLE     Structure of ribosomal protein TL5 complexed with RNA provides new
            insights into the CTC family of stress proteins
  JOURNAL   Acta Crystallogr. D Biol. Crystallogr. 57 (Pt 7), 968-976 (2001)
   PUBMED   11418764
REFERENCE   3  (residues 1 to 94)
  AUTHORS   Lu,M. and Steitz,T.A.
  TITLE     Structure of Escherichia coli ribosomal protein L25 complexed with
            a 5S rRNA fragment at 1.8-A resolution
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 97 (5), 2023-2028 (2000)
   PUBMED   10696113
REFERENCE   4  (residues 1 to 94)
  AUTHORS   Stoldt,M., Wohnert,J., Gorlach,M. and Brown,L.R.
  TITLE     The NMR structure of Escherichia coli ribosomal protein L25 shows
            homology to general stress proteins and glutaminyl-tRNA synthetases
  JOURNAL   EMBO J. 17 (21), 6377-6384 (1998)
   PUBMED   9799245
REFERENCE   5  (residues 1 to 94)
  AUTHORS   Uemura,Y., Isono,S. and Isono,K.
  TITLE     Cloning, characterization, and physical location of the rplY gene
            which encodes ribosomal protein L25 in Escherichia coli K12
  JOURNAL   Mol. Gen. Genet. 226 (1-2), 341-344 (1991)
   PUBMED   2034228
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF004612.1
            Evidence Source    :: NCBI Protein Cluster (PRK)
            Source Identifier  :: PRK05943
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Enterobacteriaceae"
                     /db_xref="taxon:543"
     gene            1..94
                     /gene="rplY"
     Protein         1..94
                     /product="50S ribosomal protein L25"
                     /GO_component="GO:0005840 - ribosome [Evidence IEA]"
                     /GO_function="GO:0003735 - structural constituent of
                     ribosome [Evidence IEA]"
                     /GO_process="GO:0006412 - translation [Evidence IEA]"
                     /calculated_mol_wt=10562
     Region          1..94
                     /region_name="PRK05943"
                     /note="50S ribosomal protein L25; Reviewed"
                     /db_xref="CDD:180318"
     Site            order(9,17..19,21,31..33,37,75..76,78,88,90,92)
                     /site_type="other"
                     /note="5S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:198379"
     Site            order(33,59,71,75,92..93)
                     /site_type="other"
                     /note="CTC domain interface [polypeptide binding]"
                     /db_xref="CDD:198379"
     Site            order(73..74,77,84,92)
                     /site_type="other"
                     /note="L16 interface [polypeptide binding]"
                     /db_xref="CDD:198379"
ORIGIN      
        1 mftinaevrk eqgkgasrrl raankfpaii yggkeaplai eldhdkvmnm qakaefysev
       61 ltivvdgkei kvkaqdvqrh pykpklqhid fvra