Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: retron St85 family effector protein [Salmonella].


LOCUS       WP_000461381             320 aa            linear   BCT 07-DEC-2020
ACCESSION   WP_000461381
VERSION     WP_000461381.1
KEYWORDS    RefSeq.
SOURCE      Salmonella
  ORGANISM  Salmonella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Millman,A., Bernheim,A., Stokar-Avihail,A., Fedorenko,T.,
            Voichek,M., Leavitt,A., Oppenheimer-Shaanan,Y. and Sorek,R.
  TITLE     Bacterial Retrons Function In Anti-Phage Defense
  JOURNAL   Cell (2020) In press
   PUBMED   33157039
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (residues 1 to 320)
  AUTHORS   Elfenbein,J.R., Knodler,L.A., Nakayasu,E.S., Ansong,C.,
            Brewer,H.M., Bogomolnaya,L., Adams,L.G., McClelland,M., Adkins,J.N.
            and Andrews-Polymenis,H.L.
  TITLE     Multicopy Single-Stranded DNA Directs Intestinal Colonization of
            Enteric Pathogens
  JOURNAL   PLoS Genet 11 (9), e1005472 (2015)
   PUBMED   26367458
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 320)
  AUTHORS   Elfenbein,J.R., Endicott-Yazdani,T., Porwollik,S.,
            Bogomolnaya,L.M., Cheng,P., Guo,J., Zheng,Y., Yang,H.J.,
            Talamantes,M., Shields,C., Maple,A., Ragoza,Y., DeAtley,K.,
            Tatsch,T., Cui,P., Andrews,K.D., McClelland,M., Lawhon,S.D. and
            Andrews-Polymenis,H.
  TITLE     Novel determinants of intestinal colonization of Salmonella
            enterica serotype typhimurium identified in bovine enteric
            infection
  JOURNAL   Infect Immun 81 (11), 4311-4320 (2013)
   PUBMED   24019407
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF038232.1
            Evidence Source    :: NCBIFAM
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Salmonella"
                     /db_xref="taxon:590"
     Protein         1..320
                     /product="retron St85 family effector protein"
                     /calculated_mol_wt=36540
     Region          16..290
                     /region_name="STM3845_fam"
                     /note="retron St85 family effector protein; NF038232"
                     /db_xref="CDD:468420"
ORIGIN      
        1 mfeetikkqf elldisnfnv dishrllfvc ggkvdvrapi ppsfrdrllt ytaknaselh
       61 ehfilaetfk dyfkenaypd llvfeddias issliiifle spgslvelgi fcnkselfkk
      121 ilivasaeev ygedsfiylg pleyikkkvs ssvviypwpd pevlkydndf lddlcvnike
      181 klssipkteq fskdnsghia lliteiislc apiqlseies alnslginis tkiinrsiyl
      241 lqkvgfidvl syssnkyyfp lkerkwvkfg ktkdnklidn qqlkmkvrqs fvtltdplsk
      301 rritalrqii akkemaeein