Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: winged helix-turn-helix domain-containing protein


LOCUS       WP_000442141             254 aa            linear   BCT 20-JAN-2025
            [Shigella].
ACCESSION   WP_000442141
VERSION     WP_000442141.1
KEYWORDS    RefSeq.
SOURCE      Shigella
  ORGANISM  Shigella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 254)
  AUTHORS   Aravind,L., Anantharaman,V., Balaji,S., Babu,M.M. and Iyer,L.M.
  TITLE     The many faces of the helix-turn-helix domain: transcription
            regulation and beyond
  JOURNAL   FEMS Microbiol Rev 29 (2), 231-262 (2005)
   PUBMED   15808743
REFERENCE   2  (residues 1 to 254)
  AUTHORS   Rosinski,J.A. and Atchley,W.R.
  TITLE     Molecular evolution of helix-turn-helix proteins
  JOURNAL   J Mol Evol 49 (3), 301-309 (1999)
   PUBMED   10473770
REFERENCE   3  (residues 1 to 254)
  AUTHORS   Wintjens,R. and Rooman,M.
  TITLE     Structural classification of HTH DNA-binding domains and
            protein-DNA interaction modes
  JOURNAL   J Mol Biol 262 (2), 294-313 (1996)
   PUBMED   8831795
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10007860
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Shigella"
                     /db_xref="taxon:620"
     Protein         1..254
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=28504
     Region          7..115
                     /region_name="CadC1"
                     /note="DNA-binding winged helix-turn-helix (wHTH) domain
                     [Transcription]; COG3710"
                     /db_xref="CDD:442924"
ORIGIN      
        1 merrcffiin daiifdpnkc slsnvntqde infpatagci lavllesngg avdrnsiids
       61 vlerfsfdls nntlnqyisl lrksfknigv eenviltipk vgfyisenit iskqsyddsh
      121 lqedvvekve rkrsiplfri lislvvvivi iemfavafkd tysitdyplv ksgkidtcdl
      181 ylsenlneig laksqieaae iskkhlpcvp ganfiydvns mhyllgegqr ylsrcikssn
      241 detyaicsev llyd