Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: site-specific tyrosine recombinase XerD [Salmonella].


LOCUS       WP_000434302             298 aa            linear   BCT 17-JUL-2023
ACCESSION   WP_000434302
VERSION     WP_000434302.1
KEYWORDS    RefSeq.
SOURCE      Salmonella
  ORGANISM  Salmonella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 298)
  AUTHORS   Castillo,F., Benmohamed,A. and Szatmari,G.
  TITLE     Xer Site Specific Recombination: Double and Single Recombinase
            Systems
  JOURNAL   Front Microbiol 8, 453 (2017)
   PUBMED   28373867
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: TIGR02225.1
            Evidence Source    :: JCVI
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Salmonella"
                     /db_xref="taxon:590"
     gene            1..298
                     /gene="xerD"
     Protein         1..298
                     /product="site-specific tyrosine recombinase XerD"
                     /GO_function="GO:0009009 - site-specific recombinase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=34089
     Region          1..298
                     /region_name="xerD"
                     /note="tyrosine recombinase; PRK00283"
                     /db_xref="CDD:234713"
     Site            order(148,244,247..248,279)
                     /site_type="active"
                     /db_xref="CDD:271179"
ORIGIN      
        1 meqdlarieq fldalwlern laentlsayr rdlsmvvawl hhrgktlata qaddlqtlla
       61 erveggykat ssarllsamr rffqhlyrek yreddpsaql aspklpqrlp kdlseaqver
      121 llqaplidqp lelrdkamle vlyatglrvs elvgltmsdi slrqgvvrvi gkgnkerlvp
      181 lgeeavywle tylehgrpwl lngvsidvlf psqraqqmtr qtfwhrikhy avlagidsek
      241 lsphvlrhaf athllnhgad lrvvqmllgh sdlsttqiyt hvaterlrql hqqhhpra