Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: itaconate degradation transcriptional regulator RipR


LOCUS       WP_000423170             292 aa            linear   BCT 18-NOV-2024
            [Salmonella].
ACCESSION   WP_000423170
VERSION     WP_000423170.1
KEYWORDS    RefSeq.
SOURCE      Salmonella
  ORGANISM  Salmonella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            REFSEQ INFORMATION: The reference sequence is identical to
            EHM2279032.1.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Salmonella"
                     /db_xref="taxon:590"
     Protein         1..292
                     /product="itaconate degradation transcriptional regulator
                     RipR"
                     /calculated_mol_wt=31832
     Region          3..62
                     /region_name="HTH_1"
                     /note="Bacterial regulatory helix-turn-helix protein, lysR
                     family; pfam00126"
                     /db_xref="CDD:459683"
     Region          93..287
                     /region_name="PBP2_BudR"
                     /note="The C-terminal substrate binding domain of
                     LysR-type transcrptional regulator BudR, which is
                     responsible for activation of the expression of the
                     butanediol operon genes; contains the type 2 periplasmic
                     binding fold; cd08451"
                     /db_xref="CDD:176142"
     Site            order(97,105,108..109,111..112,115,123,125,127,172,
                     206..207,226..227,233..234,236..237,255)
                     /site_type="other"
                     /note="putative dimerization interface [polypeptide
                     binding]"
                     /db_xref="CDD:176142"
     Site            order(98,148,196..197,204)
                     /site_type="other"
                     /note="putative substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:176142"
ORIGIN      
        1 melrhiryfl avaeerhftr aatklgigqp plsqqikdle relgaqlfrr vphgaeltea
       61 gkafydvvkg mpatatravl aaqrvarges gvlrvgftas aafnsvvpga irtfkraypd
      121 vrlqleegnt tqladelneg sldvaflrpg ftgnerfqlr llseepmviv laethpaaac
      181 kqialsilkd effllfprei glslydavik acgkagfepk igqlvpqiss vinlvsaemg
      241 vsmvpdsmrq vnvkgvvyrp vadqmpvakl alayrrgdts ptlrnfilkv tg