sigma-54 interaction domain-containing protein [Escherichia coli].

LOCUS       WP_000417831             592 aa            linear   BCT 24-DEC-2024
ACCESSION   WP_000417831
VERSION     WP_000417831.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 592)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 592)
  AUTHORS   Morett,E. and Segovia,L.
  TITLE     The sigma 54 bacterial enhancer-binding protein family: mechanism
            of action and phylogenetic relationship of their functional domains
  JOURNAL   J Bacteriol 175 (19), 6067-6074 (1993)
   PUBMED   8407777
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11467367
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..592
                     /product="sigma-54 interaction domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=65959
     Region          12..>116
                     /region_name="GAF_2"
                     /note="GAF domain; cl21515"
                     /db_xref="CDD:473894"
     Region          158..589
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
ORIGIN      
        1 melattqsvl mqiqptiqrf armlasvlql eveivdenly rvagtgaygk flgrqlsgns
       61 rllchvletk tekvvtqsrf dplcegcdsk encrekaflg tpvilqdrcv gvisliavth
      121 eqqehisdnl refsdyvrhi stifvsklle dqgpgdnisk ifatmidnmd qgvlvvddes
      181 rvqfvnqtal ktlgvvqnni igkpirfrpl tfesnfthgh mqhivswddk seliigqlhn
      241 iqgrqlflma fhqshtsfsv anapdephie qlvgecrvmr qlkrlisria pspssvmvvg
      301 esgtgkevva raihklsgrr nkpfiainca aipeqllese lfgyvkgaft gasangktgl
      361 iqaantgtlf ldeigdmplm lqakllraie areilpigas spiqvdirii satnqnlaqf
      421 iaegkfredl fyrlnvipit lpplrerqed iellvhyflh lhtrrlgsvy pgiapdvvei
      481 lrkhrwpgnl relsnlmeyl vnvvpsgevi dstllppnll nngtteqsdv tevteahlsl
      541 ddaggtalee mekqmireal srhnskkqva delgigiatl yrkikkyell nt