Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS WP_000371478 627 aa linear BCT 12-AUG-2024 [Shigella]. ACCESSION WP_000371478 VERSION WP_000371478.1 KEYWORDS RefSeq. SOURCE Shigella ORGANISM Shigella Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae. REFERENCE 1 (residues 1 to 627) AUTHORS Shalom,G., Shaw,J.G. and Thomas,M.S. TITLE In vivo expression technology identifies a type VI secretion system locus in Burkholderia pseudomallei that is induced upon invasion of macrophages JOURNAL Microbiology (Reading) 153 (Pt 8), 2689-2699 (2007) PUBMED 17660433 REFERENCE 2 (residues 1 to 627) AUTHORS Mougous,J.D., Cuff,M.E., Raunser,S., Shen,A., Zhou,M., Gifford,C.A., Goodman,A.L., Joachimiak,G., Ordonez,C.L., Lory,S., Walz,T., Joachimiak,A. and Mekalanos,J.J. TITLE A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus JOURNAL Science 312 (5779), 1526-1530 (2006) PUBMED 16763151 REFERENCE 3 (residues 1 to 627) AUTHORS Pukatzki,S., Ma,A.T., Sturtevant,D., Krastins,B., Sarracino,D., Nelson,W.C., Heidelberg,J.F. and Mekalanos,J.J. TITLE Identification of a conserved bacterial protein secretion system in Vibrio cholerae using the Dictyostelium host model system JOURNAL Proc Natl Acad Sci U S A 103 (5), 1528-1533 (2006) PUBMED 16432199 COMMENT REFSEQ: This record represents a single, non-redundant, protein sequence which may be annotated on many different RefSeq genomes from the same, or different, species. ##Evidence-For-Name-Assignment-START## Evidence Category :: HMM Evidence Accession :: TIGR03359.1 Evidence Source :: JCVI ##Evidence-For-Name-Assignment-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..627 /organism="Shigella" /db_xref="taxon:620" gene 1..627 /gene="tssF" Protein 1..627 /product="type VI secretion system baseplate subunit TssF" /GO_process="GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]" /calculated_mol_wt=70318 Region 1..624 /region_name="T6SS_TssF" /note="Type VI secretion system, TssF; pfam05947" /db_xref="CDD:428685" ORIGIN 1 mdprlleyyn relsylretg aefaarhpkv aarlgmqgtd iadpyvermv eafsfltart 61 qlkidaefpr ftqrllevvs pnyvtptpsm svaqlhpdte egdlakgftv prdtaffsai 121 pegestacqf rssqdvtlwp laieearlta appdmpalhr ylpanihvag alritlrtfg 181 eltfsqlagl drlpfylcge ertashllel lhtsaiapla gipghfdgal dvnlqqpvmy 241 eglepdqgll plawnvfhgh nllheyfacp erfyfftptg lsaglqkidg gvaeivilln 301 rlppdwlihq tnaaqfslfc tpvinlfprv taridvthst teqhlvvdrt hpldyevfsv 361 qevegletdt trkmafrply htrnndegnh gryfslrrep rrlsenarry gtrtpytgse 421 vflslvdqye apypenlrhi titamvtnrd lpcliarngr ddltvdaaip vagvglirpp 481 rspqppmaer emawrlirql sfnylpladl dhrtggqalr dllnlfipah dspqsrqvrs 541 ligckttpvt rrlpgsgllv ygrgvscelt vdeegfsgis pylfglvleh yiarhvsint 601 fsqmtlhsmq rgkimtwpvr agqrgsv