Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS WP_000354235 314 aa linear BCT 06-APR-2020 ACCESSION WP_000354235 VERSION WP_000354235.1 KEYWORDS RefSeq. SOURCE Shigella flexneri ORGANISM Shigella flexneri Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella. REFERENCE 1 (residues 1 to 314) AUTHORS Paul,R., Patra,M.D. and Sen,U. TITLE Crystal structure of apo and ligand bound vibrio cholerae ribokinase (Vc-RK): role of monovalent cation induced activation and structural flexibility in sugar phosphorylation JOURNAL Adv. Exp. Med. Biol. 842, 293-307 (2015) PUBMED 25408351 COMMENT REFSEQ: This record represents a single, non-redundant, protein sequence which may be annotated on many different RefSeq genomes from the same, or different, species. ##Evidence-For-Name-Assignment-START## Evidence Category :: HMM Evidence Accession :: NF008353.0 Evidence Source :: NCBI Protein Cluster (PRK) Source Identifier :: PRK11142 ##Evidence-For-Name-Assignment-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..314 /organism="Shigella flexneri" /db_xref="taxon:623" gene 1..314 /gene="rbsK" Protein 1..314 /product="ribokinase" /EC_number="2.7.1.15" /GO_function="GO:0004747 - ribokinase activity [Evidence IEA]" /GO_process="GO:0006014 - D-ribose metabolic process [Evidence IEA]" /calculated_mol_wt=32746 Region 9..313 /region_name="PRK11142" /note="ribokinase; Provisional" /db_xref="CDD:236858" Site order(19,21,46..48,51,103,105,115,117,148,256..257,260, 296) /site_type="other" /note="substrate binding site [chemical binding]" /db_xref="CDD:238579" Site order(22,24,29..35,48,102,104..106,112..119,174) /site_type="other" /note="dimer interface [polypeptide binding]" /db_xref="CDD:238579" Site order(192,228..230,233,246,252,255,258..259,262,284, 287..288,291) /site_type="other" /note="ATP binding site [chemical binding]" /db_xref="CDD:238579" ORIGIN 1 mdipnmqnag slvvlgsina dhilnlqsfp tpgetvtgnh yqvafggkga nqavaagrsg 61 aniafiactg ddsigesvrq qlatdnidit pvsvikgest gvalifvnge genvigihag 121 anaalspslv eaqreriana sallmqlesp lesvmaaaki ahqnktival npaparelpd 181 ellalvdiit pneteaeklt girvendeda akaaqvlhek girtvlitlg srgvwasvng 241 egqrvpgfrv qavdtiaagd tfngalital leekplpeai rfahaaaaia vtrkgaqpsv 301 pwreeidafl drqr