Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: SctD family type III secretion system inner membrane


LOCUS       WP_000323786             403 aa            linear   BCT 10-SEP-2020
            ring subunit SsaD [Salmonella].
ACCESSION   WP_000323786
VERSION     WP_000323786.1
KEYWORDS    RefSeq.
SOURCE      Salmonella
  ORGANISM  Salmonella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 403)
  AUTHORS   Liu,B., Zheng,D., Jin,Q., Chen,L. and Yang,J.
  TITLE     VFDB 2019: a comparative pathogenomic platform with an interactive
            web interface
  JOURNAL   Nucleic Acids Res. 47 (D1), D687-D692 (2019)
   PUBMED   30395255
REFERENCE   2  (residues 1 to 403)
  AUTHORS   Portaliou,A.G., Tsolis,K.C., Loos,M.S., Zorzini,V. and Economou,A.
  TITLE     Type III Secretion: Building and Operating a Remarkable Nanomachine
  JOURNAL   Trends Biochem. Sci. 41 (2), 175-189 (2016)
   PUBMED   26520801
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: BlastRule
            Evidence Accession :: NBR011345
            Evidence Source    :: NCBI
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Salmonella"
                     /db_xref="taxon:590"
     gene            1..403
                     /gene="ssaD"
     Protein         1..403
                     /product="SctD family type III secretion system inner
                     membrane ring subunit SsaD"
                     /calculated_mol_wt=44719
     Region          8..402
                     /region_name="PRK15367"
                     /note="EscD/YscD/HrpQ family type III secretion system
                     inner membrane ring protein"
                     /db_xref="CDD:185265"
ORIGIN      
        1 maylmvnpks swkirflghv lqgrevwlne gnlslgekgc diciplaine kiilreqads
       61 lfvdagkarv rvngrrfnpn kplpssgvlq vagvaiafgk qdceladyqi pvsrsgywwl
      121 agvflifigg mgvllsisgq petvndlplr vkflldksni hyvraqwked gslqlsgycs
      181 sseqmqkvra tleswgvmyr dgvicddllv revqdvlikm gyphaevsse gpgsvlihdd
      241 iqmdqqwrkv qplladipgl lhwqishshq sqgddiisai ienglvglvn vtpmrrsfvi
      301 sgvldeshqr ilqetlaalk kkdpalsliy qdiapshdes kylpapvagf vqsrhgnyll
      361 ltnkerlrvg allpnggeiv hlsadvvtik hydtlinypl dfk