Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

rRNA maturation RNase YbeY [Escherichia coli].


LOCUS       WP_000084465             155 aa            linear   BCT 29-APR-2021
ACCESSION   WP_000084465
VERSION     WP_000084465.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Moller,P., Busch,P., Sauerbrei,B., Kraus,A., Forstner,K.U.,
            Wen,T.N., Overloper,A., Lai,E.M. and Narberhaus,F.
  TITLE     The RNase YbeY Is Vital for Ribosome Maturation, Stress Resistance,
            and Virulence of the Natural Genetic Engineer Agrobacterium
            tumefaciens
  JOURNAL   J Bacteriol 201 (11), e00730-18 (2019)
   PUBMED   30885931
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 155)
  AUTHORS   Jacob,A.I., Kohrer,C., Davies,B.W., RajBhandary,U.L. and
            Walker,G.C.
  TITLE     Conserved bacterial RNase YbeY plays key roles in 70S ribosome
            quality control and 16S rRNA maturation
  JOURNAL   Mol Cell 49 (3), 427-438 (2013)
   PUBMED   23273979
REFERENCE   3  (residues 1 to 155)
  AUTHORS   Davies,B.W., Kohrer,C., Jacob,A.I., Simmons,L.A., Zhu,J.,
            Aleman,L.M., Rajbhandary,U.L. and Walker,G.C.
  TITLE     Role of Escherichia coli YbeY, a highly conserved protein, in rRNA
            processing
  JOURNAL   Mol Microbiol 78 (2), 506-518 (2010)
   PUBMED   20807199
REFERENCE   4  (residues 1 to 155)
  AUTHORS   Zhan,C., Fedorov,E.V., Shi,W., Ramagopal,U.A., Thirumuruhan,R.,
            Manjasetty,B.A., Almo,S.C., Fiser,A., Chance,M.R. and Fedorov,A.A.
  TITLE     The ybeY protein from Escherichia coli is a metalloprotein
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 61 (Pt 11),
            959-963 (2005)
   PUBMED   16511207
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: TIGR00043.2
            Evidence Source    :: JCVI
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     gene            1..155
                     /gene="ybeY"
     Protein         1..155
                     /product="rRNA maturation RNase YbeY"
                     /GO_function="GO:0004540 - ribonuclease activity [Evidence
                     IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /calculated_mol_wt=17427
     Region          6..148
                     /region_name="YbeY"
                     /note="ssRNA-specific RNase YbeY, 16S rRNA maturation
                     enzyme [Translation, ribosomal structure and biogenesis];
                     COG0319"
                     /db_xref="CDD:440088"
ORIGIN      
        1 msqvildlql acednsglpe esqfqtwlna vipqfqeese vtirvvdtae shslnltyrg
       61 kdkptnvlsf pfevppgmem sllgdlvicr qmvekeaqeq gkpleahwah mvvhgslhll
      121 gydhieddea eemealetei mlalgyedpy iaeke