Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

MULTISPECIES: RNA polymerase sigma factor RpoS [Escherichia].


LOCUS       WP_000081588             330 aa            linear   BCT 18-JUL-2020
ACCESSION   WP_000081588
VERSION     WP_000081588.1
KEYWORDS    RefSeq.
SOURCE      Escherichia
  ORGANISM  Escherichia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 330)
  AUTHORS   Chang,S.C. and Lee,C.Y.
  TITLE     OpaR and RpoS are positive regulators of a virulence factor PrtA in
            Vibrio parahaemolyticus
  JOURNAL   Microbiology (Reading, Engl.) 164 (2), 221-231 (2018)
   PUBMED   29256853
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF004207.0
            Evidence Source    :: NCBI Protein Cluster (PRK)
            Source Identifier  :: PRK05657
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Escherichia"
                     /db_xref="taxon:561"
     gene            1..330
                     /gene="rpoS"
     Protein         1..330
                     /product="RNA polymerase sigma factor RpoS"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0016987 - sigma factor activity [Evidence
                     IEA]"
                     /GO_process="GO:0006352 - DNA-templated transcription,
                     initiation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of transcription,
                     DNA-templated [Evidence IEA]"
                     /calculated_mol_wt=37841
     Region          4..328
                     /region_name="PRK05657"
                     /note="RNA polymerase sigma factor RpoS; Validated"
                     /db_xref="CDD:235548"
ORIGIN      
        1 msqntlkvhd lnedaefden gvevfdekal veqepsdndl aeeellsqga tqrvldatql
       61 ylgeigyspl ltaeeevyfa rralrgdvas rrrmiesnlr lvvkiarryg nrglalldli
      121 eegnlglira vekfdpergf rfstyatwwi rqtieraimn qtrtirlpih ivkelnvylr
      181 tarelshkld hepsaeeiae qldkpvddvs rmlrlnerit svdtplggds ekalldilad
      241 ekengpedtt qdddmkqsiv kwlfelnakq revlarrfgl lgyeaatled vgreigltre
      301 rvrqiqvegl rrlreilqtq glniealfre