Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS WP_000060930 1259 aa linear BCT 21-JAN-2025 ACCESSION WP_000060930 VERSION WP_000060930.1 KEYWORDS RefSeq. SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (residues 1 to 1259) AUTHORS Kroger,C., Dillon,S.C., Cameron,A.D., Papenfort,K., Sivasankaran,S.K., Hokamp,K., Chao,Y., Sittka,A., Hebrard,M., Handler,K., Colgan,A., Leekitcharoenphon,P., Langridge,G.C., Lohan,A.J., Loftus,B., Lucchini,S., Ussery,D.W., Dorman,C.J., Thomson,N.R., Vogel,J. and Hinton,J.C. TITLE The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium JOURNAL Proc Natl Acad Sci U S A 109 (20), E1277-E1286 (2012) PUBMED 22538806 REFERENCE 2 (residues 1 to 1259) AUTHORS Selkrig,J., Mosbahi,K., Webb,C.T., Belousoff,M.J., Perry,A.J., Wells,T.J., Morris,F., Leyton,D.L., Totsika,M., Phan,M.D., Celik,N., Kelly,M., Oates,C., Hartland,E.L., Robins-Browne,R.M., Ramarathinam,S.H., Purcell,A.W., Schembri,M.A., Strugnell,R.A., Henderson,I.R., Walker,D. and Lithgow,T. TITLE Discovery of an archetypal protein transport system in bacterial outer membranes JOURNAL Nat Struct Mol Biol 19 (5), 506-510,S1 (2012) PUBMED 22466966 REMARK Publication Status: Online-Only COMMENT REFSEQ: This record represents a single, non-redundant, protein sequence which may be annotated on many different RefSeq genomes from the same, or different, species. ##Evidence-For-Name-Assignment-START## Evidence Category :: HMM Evidence Accession :: NF047952.1 Evidence Source :: NCBIFAM ##Evidence-For-Name-Assignment-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..1259 /organism="Escherichia coli" /db_xref="taxon:562" gene 1..1259 /gene="tamB" Protein 1..1259 /product="autotransporter assembly complex protein TamB" /GO_process="GO:0009306 - protein secretion [Evidence IEA]" /GO_process="GO:0089705 - protein localization to outer membrane [Evidence IEA]" /calculated_mol_wt=136751 Region 57..>583 /region_name="TamB" /note="Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport]; COG2911" /db_xref="CDD:442155" Region 436..1259 /region_name="TamB" /note="Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport]; COG2911" /db_xref="CDD:442155" ORIGIN 1 mslwkkislg vvivillllg svaflvgtts glhlvfkaad rwvpgldigk vtggwrdltl 61 sdvryeqpgv avkagnlhla vgleclwnss vcindlalkd iqvnidskkm ppseqveeee 121 dsgpldlstp ypitltrval dnvnikiddt tvsvmdftsg lnwqektltl kptslkglli 181 alpkvaevaq eevvepkien pqpeekplge tlkdlfsrpv lpemtdvhlp lnlnieefkg 241 eqlrvtgdtd itvrtmllkv ssidgntkld aldidsnqgi lnasgtaqls dnwpvditln 301 stlnveplkg ekvklkvgga lreqleigvn lsgpvdmdlr aqtrlaeagl plnvevnskq 361 iywpftgekq yqaddlklkl tgkmtdytls mrtavkglei ppatitldak gneqqvnldk 421 ltvaalegkt elkalldwqq aiswrgeltl ngintakeip ewpsklngli ktrgslyggt 481 wqmevpelkl tgnvkqnkvn vdgtlkgnsy mqwmipglhl elgpnsaevk gelgvkdlnl 541 datinapgld nalpglggta kglvkvrgtv eapqlladit arglrwqelt vaqvrvegdi 601 kstdqiagkl dvrveqisqp dvninlvtln akgsekqhel qlriqgepvs gqlnlagsfd 661 rkeerwkgtl sntrfqtlvg pwsltrdial dyrnkeqkis igphcwlnpn aelcvpqtid 721 agaegravvn lnrfdlamlk pfmpettqas giftgkadva wdtteeglpq gsitlsgrnv 781 qvtqtvndaa lpvafqtlnl taelrnnrae lgwtirltnn gqfdgqvqvt dpqgrrnlgg 841 nvnirnfnla minpiftrge kaagmvsanl rlggdvqspq lfgqlqvtgv didgnfmpfd 901 mqpsqlavnf ngmrstlagt vrtqqgeiyl ngdadwsqie nwrarvtakg skvritvppm 961 vrmdvspdvv featpnlftl dgrvdvpwar ivvhdlpesa vgvssdvvml ndnlqpeepk 1021 tasipinsnl ivhvgnnvri dafglkarlt gdlnvvqdkq glglngqini pegrfhaygq 1081 dlivrkgell fsgppdqpyl nieairnpda teddviagvr vtgladepka eifsdpamsq 1141 qaalsyllrg qglesdqsds aamtsmligl gvaqsgqivg kigetfgvsn laldtqgvgd 1201 ssqvvvsgyv lpglqvkygv gifdsiatlt lryrlmpkly leavsgvdqa ldllyqfef