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LOCUS NP_572685 3539 aa linear INV 26-DEC-2023 ACCESSION NP_572685 VERSION NP_572685.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 DBSOURCE REFSEQ: accession NM_132457.2 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (residues 1 to 3539) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (residues 1 to 3539) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (residues 1 to 3539) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (residues 1 to 3539) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (residues 1 to 3539) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (residues 1 to 3539) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (residues 1 to 3539) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (residues 1 to 3539) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (residues 1 to 3539) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (residues 1 to 3539) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (residues 1 to 3539) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (residues 1 to 3539) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (residues 1 to 3539) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (residues 1 to 3539) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (residues 1 to 3539) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (residues 1 to 3539) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (residues 1 to 3539) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (residues 1 to 3539) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (residues 1 to 3539) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (residues 1 to 3539) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (residues 1 to 3539) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (residues 1 to 3539) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (residues 1 to 3539) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. The reference sequence is identical to AAF48000. On Mar 18, 2004 this sequence version replaced NP_572685.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## Method: conceptual translation. FEATURES Location/Qualifiers source 1..3539 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" Protein 1..3539 /product="uncharacterized protein" /name="CG11122 gene product from transcript CG11122-RA" /note="CG11122-PA" /calculated_mol_wt=384869 Region <3122..3462 /region_name="PTZ00108" /note="DNA topoisomerase 2-like protein; Provisional" /db_xref="CDD:240271" CDS 1..3539 /gene="CG11122" /locus_tag="Dmel_CG11122" /gene_synonym="Dmel\CG11122" /coded_by="NM_132457.2:1129..11748" /db_xref="FLYBASE:FBpp0073337" /db_xref="GeneID:32046" /db_xref="FLYBASE:FBgn0030266" ORIGIN 1 mktmsrfglr rgfkfseeqv ngknpigpat apataaassn prkkrqtrqe edvdaeqeev 61 ephedqleae qeplslicsl plerlprlve klhqmteere rerererere reeaaglgga 121 ahskvlclyc drkfasgklq akhvdkfhte rqerrcsgrs tssnshpagg fpgcqwcgqq 181 gnrrqatppq iclpakhleq lfqhlseqha dkyfacqpcr lrfqdadhll ghqrqqhslh 241 hpedghatkp glmgadepvl frlgltqnrl pshrnrnqrk eeeppplatp ssksrsssra 301 atqrqqqnqh qhqqsqshqq taaagnmalq esvnpdavfr lpasmacvss sasvansvfd 361 dkfykdvisn vrhnlqnhld grlftsssts ttsatsssas hksdlimlhg psqlgpggas 421 yptlltadqf ggtgellpla kfrrrphtkh swkwkwdyvk kftlineggr lvkklkqpny 481 lglrdlskld mwtqltmrqk hdlslsltee qnqeqrrlle qlnlildhrl lphiileqne 541 qavikcenee edegldshpg ddllpqtfad esflsllqlq prggsseqer qrerdqrers 601 rnqkavvlsg ewarprlylc iccgakfdqr ksleehktfr hshiyathye vvgrellagn 661 llrhlfipkr algrfaaasn cirwpqiapa atvqqpkqeq vqpeeetrss assrssyevs 721 tptplsaleq qqpspasgsg nassssscsp ssssastlls tatrtsmsns tctssaattt 781 vsstssapss ctkcgrkcsg lmdlyrhmld csgdyvwsla kkrkyryycg tkkrrafskk 841 lkqlsarkke kleveveegt gdgdgdaevd gdgeaeaege esvssssklk nsprqrpsda 901 esirkmlenl pakrickkif pvdnkakrka knkakaksma kslvksksks kqqrsstkri 961 ynqhllrttr srsrssvvat gssaaavaaq qqrsrrkqkq qqqkqqqqkq qqkkqeqkak 1021 lekvksppep paavesdqmp aktearapap tvtaksrspa eekpslrlel pqtlpeaaap 1081 nvsvhetepa sptpskqlmp tppttpapat ksppaaaava ppfcaanrqt tpnstvkrsk 1141 risdciamlt gkleeklkte qvpppgplqk ekekpqqdrp aekqdktpqp vdhqspaaav 1201 vaekervqpk tpkrkavsrr iikmdatpet laepiqerkp vamppavppp avapailnaa 1261 pappalqppi fasmpvavpv vpapvppppv aaaaplpvaa ivplpvaapa pppvatalvh 1321 pptrrtptka aakqmgappp kppaslaalk qyppleatlp vpptnsappv pvavplvpvp 1381 vpvpvpvamp lgmqgmpvpv nvnmlpklpl ymtqlqapan pnpnpnpapt amfvmadhqp 1441 lnltsqrgvl qkplisgttg dpglvglqhh raggmparrq ticgfearnl igldmemepl 1501 dlskkssrkp spvppprmqq elpmplvplp lvtnanalap qsqpggaplp tpvggapvtc 1561 qlpmsgvsgv pgvpaplash yysnldllki pqvrnpgtgv vvpssgppav sasaavaapv 1621 hpvkssggkk rstegtgssk kdngkgqaka cprmdevvnn hiddainsvi mavqasfpdd 1681 deeeqqakke kerererere rekekleepp lkpsncimpl qacaevlpsa vleksqavna 1741 ipaivappva vvpvvlapqp vpvknltpkk rsmrsrtidc rsallaleet lpaaslpqci 1801 plpvngdake empslpdpip aptpavvepq lpvqvqgptt slrdkktetv mpctnsttip 1861 tatplaespe spdpvpvnlp qaetsvpapv pvsvisvapa vlplptrtat pppttmaetn 1921 csslmeehss nlnnntssgf hslaqseqpi ptaattaeea ppvkedeelp akkkqrrrrk 1981 nelaaivadq llesfkidna rrdnlkklen layeksedll ltgmllmpst krnaalgpss 2041 aaaaklakke aadtvaespa nspvrgrpkr rqscyyrrgk aggvggvgka tnenisllks 2101 slesfsigie kqllakeare akeaqpaggn nqaqlpvssi lrpsilssav areqqltrqq 2161 qskldkqeql ppaatfsrdp rlnknihkeq adhkaapkeq satattnenp eeddnyltei 2221 aknvnekims attnedfefa hdefdgegdp dqdqdqdqdk yyrpptsmsv rsapnlndeh 2281 snfgsmcddn tntevmdmdl ddemsvytsy sqdlgrggrg rrrrrrrsvl ltrrpkkrtq 2341 rseldaekfg cklcgksfft atslskhnmt lahvskvsaq eylqsqtaps spqdghdlen 2401 krerqaetml qhqeeqpaaa qqqmrasvlm vpaqmahqer ervrelqrvq eqermqlqre 2461 qehrhqqqql qqqqqhqqqq eqvhhvitea slrlhdnqhs ptaptasrln lnpderlfye 2521 ccnilksaet prphpgggag paptsvivta grkqpppppa spspsrsssl pppaspspsl 2581 pppaspslsl pppaspspsp sppppaeata papvpaaaqp aanvchqpvi qqlfrnppav 2641 tptttptnhn rlspsysavs qfsatttsrf ktkaamkgye nvnlqmdmle laksgrgvck 2701 lteladialg sekpggeflp hlppapaapt vtslppvnqq tptptptptg tptvtptgpm 2761 eqqqsstssk timhasiika aagvassatl ppasgriiip drpfknigle ekapitfqkp 2821 ktcvnllqeq dnnsvstasy sdrddydfgt lscdgdvdpe pepevrggvv aagrvaqpqa 2881 ggravstsss sssssssadn srtgsrssss sssrataktf enkslimgri fkhassakaa 2941 pvmapsaall pgpsvvpgma kikalpknqa nldqifdelr ggsgaaksse meapptmvqe 3001 nwdrhhpqqq qqmqphhhhh hhqqqpqhhq hhhhphhhhh qvepmaapaa paapaampap 3061 salppgrkpk nstantakkp anksaptktk gkskveatap assssnrkpr kdlsklqsel 3121 gmsheeieql idegqrkskr rcatnrpkkl vetwssdeye eflctkdiia lieqkeqqeq 3181 krkrktsean tqpepvappv askkaqtpqa tagkrknras ekkaapaepe qpkprarqrn 3241 qppppapahv ppvvqappap apevltppar gkskaaaksk tpvtkatnnr kkrfneksrv 3301 qesredeeee eeqeqaevev eppdrtrssr qqpkvkanet ekepiaptpp ppaqpplpaa 3361 apeaqrersk vrqhgnqqqt lppaphprss svatpssttn nnnnssssnk nlkakrksqt 3421 srqsparrkr pasekqlyyw ssssddefgr lddeteaadg esrgagagse qrdgertele 3481 peeaspspgk hfeenetyqk hgwivgdshk klvkllaiak gskkvdncgv krrtpkrkc