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LOCUS NP_525045 3413 aa linear INV 26-DEC-2023 ACCESSION NP_525045 VERSION NP_525045.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 DBSOURCE REFSEQ: accession NM_080306.4 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (residues 1 to 3413) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (residues 1 to 3413) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (residues 1 to 3413) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (residues 1 to 3413) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (residues 1 to 3413) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (residues 1 to 3413) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (residues 1 to 3413) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (residues 1 to 3413) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (residues 1 to 3413) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (residues 1 to 3413) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (residues 1 to 3413) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (residues 1 to 3413) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (residues 1 to 3413) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (residues 1 to 3413) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (residues 1 to 3413) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (residues 1 to 3413) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (residues 1 to 3413) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (residues 1 to 3413) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (residues 1 to 3413) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (residues 1 to 3413) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (residues 1 to 3413) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (residues 1 to 3413) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (residues 1 to 3413) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. The reference sequence is identical to AAF45756. On Jul 15, 2014 this sequence version replaced NP_525045.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## Method: conceptual translation. FEATURES Location/Qualifiers source 1..3413 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" Protein 1..3413 /product="pecanex, isoform F" /name="CG3443 gene product from transcript CG3443-RF" /note="CG3443-PF; pcx-PF" /calculated_mol_wt=365196 Region 2519..2743 /region_name="Pecanex_C" /note="Pecanex protein (C-terminus); pfam05041" /db_xref="CDD:461533" CDS 1..3413 /gene="pcx" /locus_tag="Dmel_CG3443" /gene_synonym="CG3443; Dmel\CG3443; DMPCX; EG:30B8.4; fs(1)12-1012; fs(1)12-1743; fs(1)12-2135; fs(1)12-3014; fs(1)12-3102; fs(1)12-4169; fs(1)14-1153; fs(1)14-567; fs(1)A387; fs(1)M10; fs(1)pcx; mel(1)R; mel(1)R1" /coded_by="NM_080306.4:416..10657" /db_xref="FLYBASE:FBpp0310566" /db_xref="GeneID:31204" /db_xref="FLYBASE:FBgn0003048" ORIGIN 1 mgsqtleilr qgvwasltgg yfydphqgvf cnvvhlylwl yllcspfvay lyfpstwltw 61 clycvitslt ilmvklanla lhrlydraqt msegnlkgqf vkvtketepr hddeggiemk 121 virpggsris geqainease ensimsidnv nsiidlkvdv hrknssesie lmfyapsmls 181 ggsqqdqqsl agsasvsksi rstgpggnss tsaaaqadmf nkyltvypev veaagssags 241 adggssggds rsgaavstlg htgagtapaq hvrtghlsrk csevfsrrhr rrlerqssld 301 taaaaansna enklmrnqsd tiataapsfl hsqptnkarg qtnprqhfit sapstgiggg 361 daptsstavv viapasnslv npgrssrlqr hrssethder lkhqsrgglf qpilqlphhs 421 aassigalav lggggnvaan dvedmelglv rnagsggvad acsralqswi ldpfpdgyle 481 ddsytksdlg ieqphqptfr tqhrhhhhhh hlhhhlggai irkdptstms alqlaavtqp 541 gtggsvtggg gaaggggsaa gmkrrrhsna tsykhgssqs nksslvgggg srgpsgeagt 601 sggaggtggv rriksaalev lcpqpsvsnl sphpnsveai sgqqqmrnpl pppskslvrn 661 qhlnlyptqg ygdgtpsagg ggpgnsstcs slffgsssac gsttaliepp vypivehsde 721 ktaheehgdd clgigqgnad dddevddvpi rrrtralgcs qthysvesdv ggfladevga 781 dedvfkdfdd nlehilselq qthnqlddvl kthdlhhhsh lhhhkaasve gagpsggsva 841 vgvsagndde deetednntg srspllndrn rqpatlreiq adkqlrqels hqsgavipap 901 nppvpirsea dsgcpssdce qvsasskdql lsgielelqq yqilqrcqld eeqpctskma 961 akslgaipkv vkyrevdelr rrrrggspad aaeagnefal vkqtkqasrn ssssnsthsi 1021 sltdsltadi hkmlwlmhgg avddrgrpit gtsadgtpip assslvppnm snahfqfyqd 1081 aiqalqgthp tsgssvehmt nielardklr ldaklmceql vaaaeansgv rgntlatqqm 1141 tqqqvgmlmr ggsssrhpss apfsvqglin virserpaar sqldalqqls daaaalaana 1201 seaasvsasg agggassggg gvlsalglan hpsnqisqis qlsqmsqpml nvdghfapyc 1261 dywrpaclls atekpaapks fykyrfkwcg qehefkiamd rlellalfdr dlhwmhvlla 1321 sllctlvacl gaailqhdhy kdlcallfca viagaqyslv ksvqpdaasp vhgfnktvay 1381 sraiyfclag gmllllkrld tdygertpdp vvffgmrysp advvalllqa lyilllcfpi 1441 ifsvglcpqi ntflmylleq idmhvfggna assllgsflc vvrsvlavml lygplygald 1501 eqrgtqyilf sifcamlvpl gyhlsrcasd fshlwrlikt civstyrdde dedlsqmqhi 1561 atgtvtgsgt anstalqltt stpkqhrqtd vkteheqiel sslekltvne ehhekdhgad 1621 dqletdqdlp lqqkhskskt sslgssqqtl gktissskra itasssctsi gtgepaveag 1681 alteeavege eqrrntlage vgskhelaen ydqaakidec edkissssat npgdmstlta 1741 gagtattdat pacleadpda eaeapadekq hqgilgtgtg tgtgttease ngsgggangn 1801 tnsngtgndl pdplprklqa tvttrlkndl vvmtllavsv lglhcstvft alqpdlnvvl 1861 ysfigvlgll lhyivpqmrk hmpwlcfsrp llrqrefgqf evlnapkimw feklyiylsv 1921 lernvlfpll aissltadsq livakfglpw gtlivaical kfvrnaysdp tnqyliiift 1981 vllfridfam atetfiidyf fvslafrkcc dfllklqfiv tyiapwqitw gsafhafaqp 2041 fsvphsamlf lqaaisavls tplnpflgsa ifltsyvrpi kfwerdyntr ridhsntrls 2101 sqlerdlgad dnnlnsifye hltrslqhsl cgdllmgrwg nvnqgdcfvl asddlnclvh 2161 iielgnglct fqmrglefrg tycqqrevea itedvedndg ccccdpghlp qllsanamfs 2221 trwlawqvva aqyviegysi sdnlasatlq vfeyrkvlit yyiksiiyyv vknpkleqwl 2281 asgpiqdalq htlsrqfvdl dpifnfnlde dfdfravgit rssfcyvylk winycvdmrr 2341 dansmggapp aqapaaagga ssapatagva ppapvtpahn dskstpnlsa hggqagpssg 2401 qsksqsqqql rrpqksvaqe tsvggggvvv ggttvpgtgg vtggggdpql ssshsfanis 2461 rqtsesapgl ggyvaymdqn vfvklaksst ttgagagapt srkesqekpa lrlklasvgk 2521 daplvslcla lgllarrsla tashsaltgv efflhglhal fkgdfritsp rdewvfadme 2581 llhsvvapav kmalklqqdh itnpdefldp halydaidnc snelvishea dpvwrsavlr 2641 gapnllalrh vmedgsdeyr iirltkrcls frviklnrec vrglwagqqq eliylrnrnp 2701 ergsiqnakq alrniinssc dqpigypiyv splttsyadt naqlcevigg aitldtirht 2761 vlgwwhrire rcrqgcssgs alephpgsgp vqlgacnfgs ggsvvgaast atgvgastgs 2821 glgvaapgta gstggesgdl apvfisaply ntltvnsyys vrpgnvpggp ipgnlggnyv 2881 sdslavvrgg lavmpvkpts ttliagllnr erdetsgsgi mgagasgptr atssggvrsr 2941 rpevgssrgr dherratlpi asggaggepg kdltapqtqv ehepsprstk lssssgslgl 3001 gmgvglgnii ttpgdyprkt kgpicltavd tgtsssaaeg kpagsgtvag tgvggvirkp 3061 rieifkkvii vddtgiydcl diidavvwpt ermrnnggrl swkdwepsag mvghvvhcwt 3121 pnhkdirfrs hvnryvylve igdhyvpvee lglreynqim gsteemansr rssiqrdfhe 3181 yniqlklagl apiigggess tattsdasks hkakiravss sssededtss trsiplpqgd 3241 dgdltnftrl vsmwkeiild nnkrrlydmg elspellqkl ddavqqqqql edalaeeske 3301 kgtatvtane geegvgemei epeqeqkevv yleeqsplee vtvskpdeqp aqptipaspv 3361 paetsstssa kstsspslcq eeedavdpee tpelaseesp sdengeseag ttv